RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 GSKIPQ9P0R6 139 aa13.67□□□□□ -0.22
VLDLR-202ENST00000382099 IGLV3-10A0A075B6K4 115 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 B4GALT2O60909 372 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 ITGB2P05107 769 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 CD81P60033 236 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 TMEM220Q6QAJ8 160 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 DND1Q8IYX4 353 aaKnown RBP13.66□□□□□ -0.22
VLDLR-202ENST00000382099 C2orf73Q8N5S3 287 aaPredicted RBP13.66□□□□□ -0.22
VLDLR-202ENST00000382099 ADAMTS17Q8TE56 1095 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 LCN9Q8WX39 176 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 GALNT14Q96FL9 552 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 PTCHD1Q96NR3 888 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 ZNF426Q9BUY5 554 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 MAGEH1Q9H213 219 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 ADGRL4Q9HBW9 690 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 INPP5EQ9NRR6 644 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 ARL5CA6NH57 179 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 OR2AG2A6NM03 316 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 SLC16A8O95907 504 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 PRH1P02810 166 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 HTR2CP28335 458 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 S100A7P31151 101 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 RPS11P62280 158 aaKnown RBP eCLIP13.66□□□□□ -0.22
VLDLR-202ENST00000382099 CDC42EP1Q00587 391 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 NAAAQ02083 359 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 C5orf24Q7Z6I8 188 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 OR13C9Q8NGT0 318 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 OR4C6Q8NH72 309 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 ZG16BQ96DA0 208 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 LMF1Q96S06 567 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 KNL1Q8NG31 2342 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 DUXAA6NLW8 204 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 RRP8O43159 456 aaKnown RBP13.66□□□□□ -0.22
VLDLR-202ENST00000382099 GPANK1O95872 356 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 CYB5AP00167 134 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 CRHP06850 196 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 ELFN1P0C7U0 828 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 TRGC1P0CF51 173 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 IGFALSP35858 605 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 TAGLN2P37802 199 aaKnown RBP13.66□□□□□ -0.22
VLDLR-202ENST00000382099 FXYD6P3P58550 94 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 RNF219Q5W0B1 726 aaPredicted RBP13.66□□□□□ -0.22
VLDLR-202ENST00000382099 CLEC2AQ6UVW9 174 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 PAQR4Q8N4S7 273 aaPredicted RBP13.66□□□□□ -0.22
VLDLR-202ENST00000382099 OR5P2Q8WZ92 322 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 EDAQ92838 391 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 KISS1RQ969F8 398 aaPredicted RBP13.66□□□□□ -0.22
VLDLR-202ENST00000382099 CD180Q99467 661 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 CST11Q9H112 138 aa13.66□□□□□ -0.22
VLDLR-202ENST00000382099 PRUNE2Q8WUY3 3088 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 ELOA3CA0A087WX78 387 aaPredicted RBP13.65□□□□□ -0.22
VLDLR-202ENST00000382099 TGIF2-C20orf24A0A0A6YYL0 155 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 TBC1D3BA6NDS4 549 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 GEMIN2O14893 280 aaKnown RBP13.65□□□□□ -0.22
VLDLR-202ENST00000382099 CXCL1P09341 107 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 TBC1D3HP0C7X1 549 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 MSX1P28360 303 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 TBC1D3GQ6DHY5 549 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 AMER3Q8N944 861 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 ZNF740Q8NDX6 193 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 BEND2Q8NDZ0 799 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 HPSE2Q8WWQ2 592 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 FBXO32Q969P5 355 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 SLC6A7Q99884 636 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 SLC25A21Q9BQT8 299 aaPredicted RBP13.65□□□□□ -0.22
VLDLR-202ENST00000382099 LMAN1LQ9HAT1 526 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 MYNNQ9NPC7 610 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 WDR45Q9Y484 360 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 A0A087WV48 116 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.65□□□□□ -0.22
VLDLR-202ENST00000382099 SERTM1A2A2V5 107 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 UNC119BA6NIH7 251 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 RPLP1P05386 114 aaKnown RBP13.65□□□□□ -0.22
VLDLR-202ENST00000382099 TDGF1P3P51864 188 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 TAS2R19P59542 299 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 ZNF177Q13360 481 aaPredicted RBP13.65□□□□□ -0.22
VLDLR-202ENST00000382099 RFLNAQ6ZTI6 216 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 HIST1H2BLQ99880 126 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 MYOZ1Q9NP98 299 aaPredicted RBP13.65□□□□□ -0.22
VLDLR-202ENST00000382099 KLHL28Q9NXS3 571 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 SLC7A7Q9UM01 511 aa13.65□□□□□ -0.22
VLDLR-202ENST00000382099 PCYT1BQ9Y5K3 369 aaPredicted RBP13.65□□□□□ -0.22
VLDLR-202ENST00000382099 A0A1B0GVT2 93 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 C17orf102A2RUQ5 167 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 C9J4A7 227 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 CA11O75493 328 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 MDKP21741 143 aaPredicted RBP13.64□□□□□ -0.23
VLDLR-202ENST00000382099 MRPS11P82912 194 aaKnown RBP13.64□□□□□ -0.23
VLDLR-202ENST00000382099 PDE7AQ13946 482 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 FAM189A2Q15884 450 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 SOHLH1Q5JUK2 328 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 C9orf64Q5T6V5 341 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 STAC2Q6ZMT1 411 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 BHLHE23Q8NDY6 225 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 ARSGQ96EG1 525 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 SLC41A3Q96GZ6 507 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 ELOVL1Q9BW60 279 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 C1QTNF2Q9BXJ5 285 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 SAGE1Q9NXZ1 904 aa13.64□□□□□ -0.23
VLDLR-202ENST00000382099 LRG1P02750 347 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms