RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 C17orf78Q8N4C9 275 aa16.44■□□□□ 0.22
SMN2-202ENST00000380742 ZNF511Q8NB15 262 aa16.44■□□□□ 0.22
SMN2-202ENST00000380742 OR6K6Q8NGW6 343 aa16.44■□□□□ 0.22
SMN2-202ENST00000380742 FGFBP3Q8TAT2 258 aa16.44■□□□□ 0.22
SMN2-202ENST00000380742 EMC7Q9NPA0 242 aa16.44■□□□□ 0.22
SMN2-202ENST00000380742 MRPL22Q9NWU5 206 aaKnown RBP16.44■□□□□ 0.22
SMN2-202ENST00000380742 MOKQ9UQ07 419 aa16.44■□□□□ 0.22
SMN2-202ENST00000380742 CCDC182A6NF36 153 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 TVP23AA6NH52 213 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 HLA-DQA2P01906 255 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 MSR1P21757 451 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 GUCA1AP43080 201 aaPredicted RBP16.43■□□□□ 0.22
SMN2-202ENST00000380742 ISL1P61371 349 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 TUBA1BP68363 451 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 TUBA4AP68366 448 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 IL5RAQ01344 420 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 MAD2L1BPQ15013 274 aaPredicted RBP16.43■□□□□ 0.22
SMN2-202ENST00000380742 TIMM23BQ5SRD1 257 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 SLC25A30Q5SVS4 291 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 TUBA1AQ71U36 451 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 OR52N5Q8NH56 324 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 LINC01560Q8TB33 94 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 APH1BQ8WW43 257 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 ZMYND19Q96E35 227 aaPredicted RBP16.43■□□□□ 0.22
SMN2-202ENST00000380742 ZNF582Q96NG8 517 aaPredicted RBP16.43■□□□□ 0.22
SMN2-202ENST00000380742 WFIKKN1Q96NZ8 548 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 TEAD3Q99594 435 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 ZNF416Q9BWM5 594 aa16.43■□□□□ 0.22
SMN2-202ENST00000380742 H2AFY2Q9P0M6 372 aaPredicted RBP16.43■□□□□ 0.22
SMN2-202ENST00000380742 A1L4Q6 167 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 SH3D21A4FU49 640 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 MPZL2O60487 215 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 ENTPD6O75354 484 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 FARS2O95363 451 aaKnown RBP16.42■□□□□ 0.22
SMN2-202ENST00000380742 HLA-HP01893 362 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 THBDP07204 575 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 PATE4P0C8F1 98 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 HOXB1P14653 301 aaPredicted RBP16.42■□□□□ 0.22
SMN2-202ENST00000380742 IGFBP2P18065 325 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 FMO3P31513 532 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 HSPA13P48723 471 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 RPS7P62081 194 aaKnown RBP16.42■□□□□ 0.22
SMN2-202ENST00000380742 TEKQ02763 1124 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 ENDOGQ14249 297 aaKnown RBP16.42■□□□□ 0.22
SMN2-202ENST00000380742 TAB1Q15750 504 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 OCLNQ16625 522 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 SLC35D3Q5M8T2 416 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 MEPCEQ7L2J0 689 aaKnown RBP16.42■□□□□ 0.22
SMN2-202ENST00000380742 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.42■□□□□ 0.22
SMN2-202ENST00000380742 P2RY8Q86VZ1 359 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 GID4Q8IVV7 300 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 SETD9Q8NE22 299 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 FBXO17Q96EF6 278 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 ZNF184Q99676 751 aaPredicted RBP16.42■□□□□ 0.22
SMN2-202ENST00000380742 USB1Q9BQ65 265 aaKnown RBP16.42■□□□□ 0.22
SMN2-202ENST00000380742 WDR76Q9H967 626 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 SLC25A15Q9Y619 301 aa16.42■□□□□ 0.22
SMN2-202ENST00000380742 ARPC4-TTLL3A0A0A6YYG9 625 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 PRSS44E7EML9 344 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 WBP4O75554 376 aaKnown RBP16.41■□□□□ 0.22
SMN2-202ENST00000380742 HRGP04196 525 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 CST2P09228 141 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 PSKH1P11801 424 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 PPP3CBP16298 524 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 GSTT1P30711 240 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 BLVRAP53004 296 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 MEDAGQ5VYS4 303 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 SLC16A14Q7RTX9 510 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 C8orf59Q8N0T1 100 aaPredicted RBP16.41■□□□□ 0.22
SMN2-202ENST00000380742 CNIH3Q8TBE1 160 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 HSD17B8Q92506 261 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 MARCH7Q9H992 704 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 NOX3Q9HBY0 568 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 B3GNT2Q9NY97 397 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 RAB26Q9ULW5 256 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 AMDHD2Q9Y303 409 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 COMMD3-BMI1R4GMX3 469 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 HSPE1-MOB4S4R3N1 261 aa16.41■□□□□ 0.22
SMN2-202ENST00000380742 MMP7P09237 267 aaPredicted RBP16.4■□□□□ 0.22
SMN2-202ENST00000380742 HOXC12P31275 282 aa16.4■□□□□ 0.22
SMN2-202ENST00000380742 CAPZA2P47755 286 aa16.4■□□□□ 0.22
SMN2-202ENST00000380742 CDH11P55287 796 aa16.4■□□□□ 0.22
SMN2-202ENST00000380742 UBE2NP61088 152 aaKnown RBP16.4■□□□□ 0.22
SMN2-202ENST00000380742 LSM6P62312 80 aaKnown RBP16.4■□□□□ 0.22
SMN2-202ENST00000380742 PIGFQ07326 219 aa16.4■□□□□ 0.22
SMN2-202ENST00000380742 PPA1Q15181 289 aa16.4■□□□□ 0.22
SMN2-202ENST00000380742 SEZ6L2Q6UXD5 910 aa16.4■□□□□ 0.22
SMN2-202ENST00000380742 DMRTC2Q8IXT2 367 aaPredicted RBP16.4■□□□□ 0.22
SMN2-202ENST00000380742 ACBD4Q8NC06 268 aa16.4■□□□□ 0.22
SMN2-202ENST00000380742 ZC3HAV1LQ96H79 300 aaKnown RBP16.4■□□□□ 0.22
SMN2-202ENST00000380742 MED18Q9BUE0 208 aa16.4■□□□□ 0.22
SMN2-202ENST00000380742 ANKRD60Q9BZ19 345 aa16.4■□□□□ 0.22
SMN2-202ENST00000380742 NDRG3Q9UGV2 375 aa16.4■□□□□ 0.22
SMN2-202ENST00000380742 LRRK2Q5S007 2527 aa16.4■□□□□ 0.22
SMN2-202ENST00000380742 TUBAL3A6NHL2 446 aa16.39■□□□□ 0.21
SMN2-202ENST00000380742 SLC22A31A6NKX4 558 aa16.39■□□□□ 0.21
SMN2-202ENST00000380742 CD79AP11912 226 aa16.39■□□□□ 0.21
SMN2-202ENST00000380742 HTR1FP30939 366 aa16.39■□□□□ 0.21
SMN2-202ENST00000380742 RPS27P42677 84 aaKnown RBP16.39■□□□□ 0.21
SMN2-202ENST00000380742 SMN1Q16637 294 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms