RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 PRAMEF26H0Y7S4 382 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 NDUFB6O95139 128 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 ZNF14P17017 642 aaPredicted RBP10.35□□□□□ -0.75
SMAD9-202ENST00000379826 GLO1Q04760 184 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 FJX1Q86VR8 437 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 PLXDC1Q8IUK5 500 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 C19orf47Q8N9M1 422 aaKnown RBP10.35□□□□□ -0.75
SMAD9-202ENST00000379826 PRSS27Q9BQR3 290 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 CES1P1Q9UKY3 287 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 VWA8A3KMH1 1905 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 GGT3PA6NGU5 568 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 GALR3O60755 368 aaPredicted RBP10.35□□□□□ -0.75
SMAD9-202ENST00000379826 MOSPD3O75425 235 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 SGCAQ16586 387 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 ZNF626Q68DY1 528 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 OR51T1Q8NGJ9 327 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 FBXW5Q969U6 566 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 SCGB3A2Q96PL1 93 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 KCNJ15Q99712 375 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 ZNF768Q9H5H4 540 aaKnown RBP10.35□□□□□ -0.75
SMAD9-202ENST00000379826 ACKR4Q9NPB9 350 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 C2orf42Q9NWW7 574 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 PTPRZ1P23471 2315 aaPredicted RBP10.35□□□□□ -0.75
SMAD9-202ENST00000379826 TMEM235A6NFC5 223 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 EML2O95834 649 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 IFNA21P01568 189 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 FBLP22087 321 aaKnown RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 RBMXP38159 391 aaKnown RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 ZNF41P51814 821 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 NKAIN2Q5VXU1 208 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 PAPD4Q6PIY7 484 aaKnown RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 RSC1A1Q92681 617 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 C3orf49Q96BT1 292 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 SORCS2Q96PQ0 1159 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 WDR77Q9BQA1 342 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 ANKRD20A5PA0PJZ0 165 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 SNRPGP15A8MWD9 76 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 CBX7O95931 251 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 RAB3AP20336 220 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 UBE2IP63279 158 aaKnown RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 CSNK2A1P68400 391 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 PRICKLE4Q2TBC4 344 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 CDONQ4KMG0 1287 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 CSNK2A3Q8NEV1 391 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 OR4D10Q8NGI6 311 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 NT5CQ8TCD5 201 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 CFHR5Q9BXR6 569 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 TINAGL1Q9GZM7 467 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 RPS10P5Q9NQ39 176 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 PRDM6Q9NQX0 595 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 HHLA2Q9UM44 414 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 CKAP5Q14008 2032 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 MYOFQ9NZM1 2061 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 TBX6O95947 436 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 HOXB5P09067 269 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 SDHAP31040 664 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 DRD3P35462 400 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 SNRPNP63162 240 aaKnown RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 MEF2DQ14814 521 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 CLVS2Q5SYC1 327 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 FCRL6Q6DN72 434 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 SVBPQ8N300 66 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 PHYHIPQ92561 330 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 C7orf66A4D0T2 115 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 GSTZ1O43708 216 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 CDKN2AP42771 156 aaKnown RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 BPIFCQ8NFQ6 507 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 PNPLA2Q96AD5 504 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 FGGYQ96C11 551 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 RGCCQ9H4X1 137 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 POLE3Q9NRF9 147 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 VSX1Q9NZR4 365 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 ZNF230Q9UIE0 474 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-202ENST00000379826 SLC17A4Q9Y2C5 497 aa10.34□□□□□ -0.75
SMAD9-202ENST00000379826 OR5H14A6NHG9 310 aa10.33□□□□□ -0.75
SMAD9-202ENST00000379826 FBXO24O75426 580 aa10.33□□□□□ -0.75
SMAD9-202ENST00000379826 GLSO94925 669 aaPredicted RBP10.33□□□□□ -0.75
SMAD9-202ENST00000379826 ZNF136P52737 540 aa10.33□□□□□ -0.75
SMAD9-202ENST00000379826 STK11Q15831 433 aa10.33□□□□□ -0.75
SMAD9-202ENST00000379826 DCAF12Q5T6F0 453 aa10.33□□□□□ -0.75
SMAD9-202ENST00000379826 FAM71CQ8NEG0 241 aa10.33□□□□□ -0.75
SMAD9-202ENST00000379826 OR4K15Q8NH41 348 aa10.33□□□□□ -0.75
SMAD9-202ENST00000379826 TTC9Q92623 222 aa10.33□□□□□ -0.75
SMAD9-202ENST00000379826 ELSPBP1Q96BH3 223 aa10.33□□□□□ -0.75
SMAD9-202ENST00000379826 PGLYRP3Q96LB9 341 aa10.33□□□□□ -0.75
SMAD9-202ENST00000379826 TWSG1Q9GZX9 223 aa10.33□□□□□ -0.75
SMAD9-202ENST00000379826 METTL7AQ9H8H3 244 aa10.33□□□□□ -0.75
SMAD9-202ENST00000379826 COA3Q9Y2R0 106 aaPredicted RBP10.33□□□□□ -0.75
SMAD9-202ENST00000379826 MCRIP1C9JLW8 97 aa10.33□□□□□ -0.76
SMAD9-202ENST00000379826 XRCC3O43542 346 aa10.33□□□□□ -0.76
SMAD9-202ENST00000379826 EIF5AP63241 154 aaKnown RBP10.33□□□□□ -0.76
SMAD9-202ENST00000379826 RIPPLY1Q0D2K3 151 aa10.33□□□□□ -0.76
SMAD9-202ENST00000379826 C16orf52Q8NHV5 167 aa10.33□□□□□ -0.76
SMAD9-202ENST00000379826 ATPIF1Q9UII2 106 aa10.33□□□□□ -0.76
SMAD9-202ENST00000379826 PCDHGA5Q9Y5G8 931 aa10.33□□□□□ -0.76
SMAD9-202ENST00000379826 SCN3AQ9NY46 2000 aa10.33□□□□□ -0.76
SMAD9-202ENST00000379826 NUMA1Q14980 2115 aa10.33□□□□□ -0.76
SMAD9-202ENST00000379826 MED6O75586 246 aa10.33□□□□□ -0.76
SMAD9-202ENST00000379826 RAB5BP61020 215 aa10.33□□□□□ -0.76
SMAD9-202ENST00000379826 PPP1CAP62136 330 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms