RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 OR2T4Q8NH00 348 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 LILRB1Q8NHL6 650 aaPredicted RBP16.3■□□□□ 0.2
SSU72-203ENST00000378725 PTP4A1Q93096 173 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 TEX12Q9BXU0 123 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 GABARAPL3Q9BY60 117 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 KCNN2Q9H2S1 579 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 FN3KQ9H479 309 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 RERGLQ9H628 205 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 FBXL3Q9UKT7 428 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 RNF115Q9Y4L5 304 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 NBPF19A0A087WUL8 3843 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 EI24O14681 340 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 MPZL1O95297 269 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 CECR9P0C854 216 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 GAAP10253 952 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 EPHA2P29317 976 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 HSF2Q03933 536 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 GLO1Q04760 184 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 DBPQ10586 325 aaPredicted RBP16.29■□□□□ 0.2
SSU72-203ENST00000378725 NPRL3Q12980 569 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 RCN1Q15293 331 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 SLX4IPQ5VYV7 408 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 TMEM53Q6P2H8 277 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 UGT2A3Q6UWM9 527 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 ZNF704Q6ZNC4 412 aaPredicted RBP16.29■□□□□ 0.2
SSU72-203ENST00000378725 IL17RDQ8NFM7 739 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 ZNRF4Q8WWF5 429 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 C11orf40Q8WZ69 217 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 FOXN4Q96NZ1 517 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 SLC29A1Q99808 456 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 ZNF416Q9BWM5 594 aa16.29■□□□□ 0.2
SSU72-203ENST00000378725 C12orf71A8MTZ7 269 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 SHISA9B4DS77 424 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 ABCD4O14678 606 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 RAB36O95755 333 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 GPANK1O95872 356 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 SERPINA5P05154 406 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 CELA3BP08861 270 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 POLR2IP36954 125 aaKnown RBP16.28■□□□□ 0.2
SSU72-203ENST00000378725 IDH3GP51553 393 aaPredicted RBP16.28■□□□□ 0.2
SSU72-203ENST00000378725 PCBD1P61457 104 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 EFNB1P98172 346 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 NAAAQ02083 359 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 C12orf73Q69YU5 71 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 ZBTB49Q6ZSB9 765 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 MYPOPQ86VE0 399 aaPredicted RBP16.28■□□□□ 0.2
SSU72-203ENST00000378725 ZNF584Q8IVC4 421 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 SLC26A10Q8NG04 563 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 EME1Q96AY2 570 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 RNF121Q9H920 327 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 EMC7Q9NPA0 242 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 CCNB1IP1Q9NPC3 277 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 TVP23BQ9NYZ1 205 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 TIMM10BQ9Y5J6 103 aa16.28■□□□□ 0.2
SSU72-203ENST00000378725 FAM171A2A8MVW0 826 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 E9PQ18 207 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 TFP02787 698 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 ZNF32P17041 273 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 SPI1P17947 270 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 PYCR1P32322 319 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 CENPAP49450 140 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 PSG4Q00888 419 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 SPOCK1Q08629 439 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 RAB39AQ14964 217 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 OR9Q1Q8NGQ5 310 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 MS4A3Q96HJ5 214 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 LURAP1Q96LR2 239 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 HCAR1Q9BXC0 346 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 DCLRE1BQ9H816 532 aa16.27■□□□□ 0.2
SSU72-203ENST00000378725 PRR14LQ5THK1 2151 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 FAM183AA6NL82 134 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 CLUP10909 449 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 ZNF35P13682 527 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 PAICSP22234 425 aaKnown RBP16.26■□□□□ 0.19
SSU72-203ENST00000378725 CALCRP30988 508 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 RAD23AP54725 363 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 TEKQ02763 1124 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 SNAPC1Q16533 368 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 ZNF672Q499Z4 452 aaPredicted RBP16.26■□□□□ 0.19
SSU72-203ENST00000378725 PABPC1L2AQ5JQF8 200 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 LINC01590Q5TEZ4 76 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 DEPDC4Q8N2C3 294 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 PIAS4Q8N2W9 510 aaPredicted RBP16.26■□□□□ 0.19
SSU72-203ENST00000378725 PROKR2Q8NFJ6 384 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 KBTBD8Q8NFY9 601 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 PRRG3Q9BZD7 231 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 GRIP2Q9C0E4 1043 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 OR2H1Q9GZK4 316 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 WNT5BQ9H1J7 359 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 RIBC2Q9H4K1 309 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 MED20Q9H944 212 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 HINT3Q9NQE9 182 aaKnown RBP16.26■□□□□ 0.19
SSU72-203ENST00000378725 MRPL22Q9NWU5 206 aaKnown RBP16.26■□□□□ 0.19
SSU72-203ENST00000378725 MOKQ9UQ07 419 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 ORC6Q9Y5N6 252 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 CELSR2Q9HCU4 2923 aa16.26■□□□□ 0.19
SSU72-203ENST00000378725 FLNBO75369 2602 aaKnown RBP16.25■□□□□ 0.19
SSU72-203ENST00000378725 UNC79Q9P2D8 2635 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 IGHV2OR16-5A0A0B4J2B6 119 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 PRR23D1E9PI22 279 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms