RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 CD300LDQ6UXZ3 194 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF565Q8N9K5 539 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 TAAR8Q969N4 342 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 DCBLD2Q96PD2 775 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 TSPAN10Q9H1Z9 355 aaPredicted RBP12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 NIPAL2Q9H841 368 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 FBXL4Q9UKA2 621 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 NAGAP17050 411 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 FOXK1P85037 733 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 FIP1L1Q6UN15 594 aaKnown RBP12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 OR51T1Q8NGJ9 327 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 TMEM74BQ9NUR3 256 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 FLRT3Q9NZU0 649 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 COPZ2Q9P299 210 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 OR52A1Q9UKL2 312 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 CHST2Q9Y4C5 530 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 ARPC5O15511 151 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 IFNA21P01568 189 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 SRMP19623 302 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 BAK1Q16611 211 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 MAML2Q8IZL2 1156 aaPredicted RBP12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 OR13C5Q8NGS8 318 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 MIB2Q96AX9 1013 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF501Q96CX3 271 aaPredicted RBP12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 MAP6Q96JE9 813 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 SLIRPQ9GZT3 109 aaKnown RBP12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 KCNG2Q9UJ96 466 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 TCRBV16S1A1N1A0A5B0 115 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 ANKUB1A6NFN9 424 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 CBR3O75828 277 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 RAB3DO95716 219 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 RLN2P04090 185 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 RAB40ALP0C0E4 278 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 DBPQ10586 325 aaPredicted RBP12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 FAPQ12884 760 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 COX15Q7KZN9 410 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 KIF18BQ86Y91 864 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 SYS1Q8N2H4 156 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 DEFB124Q8NES8 71 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 RAB40AQ8WXH6 277 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 PHYHIPQ92561 330 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 FGGYQ96C11 551 aa12.85□□□□□ -0.35
SHROOM1-203ENST00000378679 IGHV3-15A0A0B4J1V0 119 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 PRAMEF27A3QJZ7 478 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF850A8MQ14 1090 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 STMND1H3BQB6 276 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 ARPC3O15145 178 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 ABOP16442 354 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 NPSR1Q6W5P4 371 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 LRRC69Q6ZNQ3 347 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF767PQ75MW2 155 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 GJC3Q8NFK1 279 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 OR51D1Q8NGF3 324 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 OR5D18Q8NGL1 313 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 PIGCQ92535 297 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 SLC25A46Q96AG3 418 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 ZNF845Q96IR2 970 aaPredicted RBP12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 MOGAT1Q96PD6 335 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 CACNG2Q9Y698 323 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 ALDOBP05062 364 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 GIFP27352 417 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 EIF3IQ13347 325 aaKnown RBP12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 FCN2Q15485 313 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 FAM27D1Q5T7N8 215 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 LIX1LQ8IVB5 337 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 MFSD4AQ8N468 514 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 ZSCAN4Q8NAM6 433 aaPredicted RBP12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 FOXRED1Q96CU9 486 aaPredicted RBP12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 GSKIPQ9P0R6 139 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 MBD2Q9UBB5 411 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 REV1Q9UBZ9 1251 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 CREBL2O60519 120 aaPredicted RBP12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 TOMM34Q15785 309 aaPredicted RBP12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 PLPP7Q8NBV4 271 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 APH1BQ8WW43 257 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 DEFB127Q9H1M4 99 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 HRH3Q9Y5N1 445 aa12.84□□□□□ -0.35
SHROOM1-203ENST00000378679 ALX3O95076 343 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 SPDEFO95238 335 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 SERPINA5P05154 406 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 LIMS3P0CW19 117 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 LIMS4P0CW20 117 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 CASP6P55212 293 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 C1QL3Q5VWW1 255 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 WDR5BQ86VZ2 330 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 OR2Y1Q8NGV0 311 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 FBXO8Q9NRD0 319 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 B9D1Q9UPM9 204 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 RCE1Q9Y256 329 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 MEMO1Q9Y316 297 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 HDGFL3Q9Y3E1 203 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 HRO43593 1189 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 MAP2K6P52564 334 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 MYBPHQ13203 477 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 CDK5R1Q15078 307 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 METAP1DQ6UB28 335 aaPredicted RBP12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 ACBD4Q8NC06 268 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 KLF13Q9Y2Y9 288 aaPredicted RBP12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 RHBDD3Q9Y3P4 386 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 MRPS10P82664 201 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms