RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 USP22Q9UPT9 525 aa12.94□□□□□ -0.34
TRIM13-202ENST00000378182 A0A1B0GWA3 101 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 KEAP1Q14145 624 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 C15orf54Q8N8G6 183 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 SARAFQ96BY9 339 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 ASB4Q9Y574 426 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 FABP1P07148 127 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 GPX3P22352 226 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 ARR3P36575 388 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 SKA3Q8IX90 412 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 UBALD2Q8IYN6 164 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 R3HDMLQ9H3Y0 253 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 SLAMF8Q9P0V8 285 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 IDSB3KWA1 339 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 GPR171O14626 319 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 ICOSLGO75144 302 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 B3GALNT1O75752 331 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 PMPCAQ10713 525 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 SLC22A24Q8N4F4 322 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 OSGIN1Q9UJX0 560 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 SIGLEC1Q9BZZ2 1709 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 OPRL1P41146 370 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 Q56UQ5 140 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 ZMAT1Q5H9K5 638 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 OR8U1Q8NH10 309 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 NINQ8N4C6 2090 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 RAP2BP61225 183 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 BTG2P78543 158 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 REEP5Q00765 189 aa12.93□□□□□ -0.34
TRIM13-202ENST00000378182 RGS7BPQ6MZT1 257 aaPredicted RBP12.93□□□□□ -0.34
TRIM13-202ENST00000378182 MBLAC1A4D2B0 266 aaPredicted RBP12.92□□□□□ -0.34
TRIM13-202ENST00000378182 TMEM189-UBE2V1I3L0A0 370 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 THBS1P07996 1170 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 HSD17B1P14061 328 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 IVDP26440 423 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 NDFIP1Q9BT67 221 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 ESRP2Q9H6T0 727 aaKnown RBP12.92□□□□□ -0.34
TRIM13-202ENST00000378182 ANGPTL7O43827 346 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 RPS25P62851 125 aaKnown RBP12.92□□□□□ -0.34
TRIM13-202ENST00000378182 HLA-BQ31612 363 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 C17orf107Q6ZR85 190 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 PLPP5Q8NEB5 264 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 TMEM106AQ96A25 262 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 TIMM9Q9Y5J7 89 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 ERHP84090 104 aaKnown RBP12.92□□□□□ -0.34
TRIM13-202ENST00000378182 KCTD11Q693B1 232 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 TMEM179BQ7Z7N9 219 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 ZNF583Q96ND8 569 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 TMEM208Q9BTX3 173 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 SCN11AQ9UI33 1791 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 CTNSO60931 367 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 GLAP06280 429 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 CSNK1DP48730 415 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 ACSM1Q08AH1 577 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 ZNF816Q0VGE8 651 aaPredicted RBP12.92□□□□□ -0.34
TRIM13-202ENST00000378182 ALKBH1Q13686 389 aaKnown RBP12.92□□□□□ -0.34
TRIM13-202ENST00000378182 CRMP1Q14194 572 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 ACKR1Q16570 336 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 Q7L0L9 218 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 PGBD5Q8N414 524 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 WFDC5Q8TCV5 224 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 IKZF5Q9H5V7 419 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 CHRNA9Q9UGM1 479 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 OR6C76A6NM76 312 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 CDK2AP1O14519 115 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 SSSCA1O60232 199 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 SOX15O60248 233 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 PPT1P50897 306 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 MAP2K6P52564 334 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 PCBP3P57721 371 aaKnown RBP12.92□□□□□ -0.34
TRIM13-202ENST00000378182 ZNF705AQ6ZN79 300 aaPredicted RBP12.92□□□□□ -0.34
TRIM13-202ENST00000378182 C1orf87Q8N0U7 546 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 RDH5Q92781 318 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 KIRREL1Q96J84 757 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 SEMA4GQ9NTN9 838 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 NAP1L6A6NFF2 107 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 RBP4P02753 201 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 SHC1P29353 583 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 INSM1Q01101 510 aaPredicted RBP12.92□□□□□ -0.34
TRIM13-202ENST00000378182 MS4A2Q01362 244 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 GDF7Q7Z4P5 450 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 HAVCR2Q8TDQ0 301 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 SPACA5Q96QH8 159 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 FAM103A1Q9BTL3 118 aaKnown RBP12.92□□□□□ -0.34
TRIM13-202ENST00000378182 RSRP1Q9BUV0 290 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 C20orf24Q9BUV8 137 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 KIR3DX1Q9H7L2 352 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 TMEM181Q9P2C4 612 aa12.92□□□□□ -0.34
TRIM13-202ENST00000378182 UPK1BO75841 260 aa12.91□□□□□ -0.34
TRIM13-202ENST00000378182 CT45A10P0DMU9 189 aa12.91□□□□□ -0.34
TRIM13-202ENST00000378182 IAPPP10997 89 aa12.91□□□□□ -0.34
TRIM13-202ENST00000378182 PSMB3P49720 205 aa12.91□□□□□ -0.34
TRIM13-202ENST00000378182 TFF2Q03403 129 aa12.91□□□□□ -0.34
TRIM13-202ENST00000378182 ACTBL2Q562R1 376 aa12.91□□□□□ -0.34
TRIM13-202ENST00000378182 LPCAT3Q6P1A2 487 aa12.91□□□□□ -0.34
TRIM13-202ENST00000378182 BCORP1Q8N888 145 aa12.91□□□□□ -0.34
TRIM13-202ENST00000378182 NPEPL1Q8NDH3 523 aa12.91□□□□□ -0.34
TRIM13-202ENST00000378182 GHSRQ92847 366 aa12.91□□□□□ -0.34
TRIM13-202ENST00000378182 TSLPQ969D9 159 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms