RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 SIGLEC11Q96RL6 698 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 CXCL16Q9H2A7 254 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 COL4A1P02462 1669 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF814B7Z6K7 855 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 J3KTA2 159 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 TRAPPC6AO75865 159 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 IGHV2-5P01817 119 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 BCHEP06276 602 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 LAMP2P13473 410 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 NID1P14543 1247 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 KHKP50053 298 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 C18orf21Q32NC0 220 aaPredicted RBP10.79□□□□□ -0.68
NPHP4-202ENST00000378161 LINC01465Q8N7H1 131 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 OR4K5Q8NGD3 323 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 BBS10Q8TAM1 723 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 FAM213BQ8TBF2 198 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 OR2J1Q9GZK6 312 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 NPDC1Q9NQX5 325 aaPredicted RBP10.79□□□□□ -0.68
NPHP4-202ENST00000378161 CLEC5AQ9NY25 188 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 KLK11Q9UBX7 282 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 NDOR1Q9UHB4 597 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 EXOGQ9Y2C4 368 aaKnown RBP10.79□□□□□ -0.68
NPHP4-202ENST00000378161 DRGXA6NNA5 263 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 COCHO43405 550 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 ZFPL1O95159 310 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 GJB5O95377 273 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 OR5G3P0C626 314 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 LAG3P18627 525 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 TAS2R50P59544 299 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 STEAP1BQ6NZ63 245 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 CD99L2Q8TCZ2 262 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 NUDT8Q8WV74 236 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 BCL2L2Q92843 193 aaPredicted RBP10.79□□□□□ -0.68
NPHP4-202ENST00000378161 ISG20Q96AZ6 181 aaKnown RBP10.79□□□□□ -0.68
NPHP4-202ENST00000378161 TBX15Q96SF7 602 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 TWSG1Q9GZX9 223 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 SEPSECSQ9HD40 501 aaKnown RBP10.79□□□□□ -0.68
NPHP4-202ENST00000378161 STEAP1Q9UHE8 339 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 A6NIZ1 184 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 DHRS7CA6NNS2 312 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 OR1F1O43749 312 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 SLC25A17O43808 307 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 OPN1MWP04001 364 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 OPN1MW2P0DN77 364 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 OPN1MW3P0DN78 364 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 F3P13726 295 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 SAMD13Q5VXD3 122 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 WDR73Q6P4I2 378 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 SLC26A10Q8NG04 563 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 TVP23CQ96ET8 276 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 CAPNS2Q96L46 248 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 DEFB118Q96PH6 123 aa10.79□□□□□ -0.68
NPHP4-202ENST00000378161 PRRC2BQ5JSZ5 2229 aaKnown RBP10.78□□□□□ -0.68
NPHP4-202ENST00000378161 ARID1AO14497 2285 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 FAM171A2A8MVW0 826 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 C17orf105B2RV13 164 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 SLC11A1P49279 550 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 RAP1BP61224 184 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 SLC22A6Q4U2R8 563 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 XKR4Q5GH76 650 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 RPUSD3Q6P087 351 aaKnown RBP10.78□□□□□ -0.68
NPHP4-202ENST00000378161 C19orf48Q6RUI8 117 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 MITD1Q8WV92 249 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 C16orf58Q96GQ5 468 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 TAAR9Q96RI9 348 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 TBL1XR1Q9BZK7 514 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 NRSN2Q9GZP1 204 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 KATNBL1Q9H079 304 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF701Q9NV72 531 aaPredicted RBP10.78□□□□□ -0.68
NPHP4-202ENST00000378161 B4GALT6Q9UBX8 382 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 TRBV2A0A0J9YWF9 115 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF736B4DX44 427 aaPredicted RBP10.78□□□□□ -0.68
NPHP4-202ENST00000378161 EPHX1P07099 455 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 FAM157BP0CG42 384 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 ALPPL2P10696 532 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 TIA1P31483 386 aaKnown RBP eCLIP10.78□□□□□ -0.68
NPHP4-202ENST00000378161 SOX18P35713 384 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 TNFSF10P50591 281 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 KLF9Q13886 244 aaPredicted RBP10.78□□□□□ -0.68
NPHP4-202ENST00000378161 CEBPEQ15744 281 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 NKPD1Q17RQ9 610 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 GXYLT1Q4G148 440 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 TXNDC8Q6A555 127 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 Q6ZN92 141 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 SEMA4GQ9NTN9 838 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 PIPOXQ9P0Z9 390 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 CLDN16Q9Y5I7 305 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 LTBP4Q8N2S1 1624 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 TRAV34A0A0B4J273 112 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 FAM230AA0A1W2PPH8 454 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 OR2M5A3KFT3 312 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 MRPL3P09001 348 aaKnown RBP10.78□□□□□ -0.68
NPHP4-202ENST00000378161 OR12D1P0DN82 309 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF16P17020 682 aaPredicted RBP10.78□□□□□ -0.68
NPHP4-202ENST00000378161 RGNQ15493 299 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 VWA2Q5GFL6 755 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 CLECL1Q8IZS7 167 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 CBARPQ8N350 705 aaPredicted RBP10.78□□□□□ -0.68
NPHP4-202ENST00000378161 IP6K3Q96PC2 410 aa10.78□□□□□ -0.68
NPHP4-202ENST00000378161 KCNG2Q9UJ96 466 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms