RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 APEHP13798 732 aaKnown RBP12.41□□□□□ -0.42
C9orf47-203ENST00000375851 PTBP1P26599 531 aaKnown RBP eCLIP12.41□□□□□ -0.42
C9orf47-203ENST00000375851 GABRA2P47869 451 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 TIAL1Q01085 375 aaKnown RBP eCLIP12.41□□□□□ -0.42
C9orf47-203ENST00000375851 PMPCAQ10713 525 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 OR1J2Q8NGS2 313 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 PCED1AQ9H1Q7 454 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 FGF20Q9NP95 211 aaPredicted RBP12.41□□□□□ -0.42
C9orf47-203ENST00000375851 B3GALT5Q9Y2C3 310 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 DOCK5Q9H7D0 1870 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 SERTM1A2A2V5 107 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 CHRM2P08172 466 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 ZNF14P17017 642 aaPredicted RBP12.41□□□□□ -0.42
C9orf47-203ENST00000375851 SOX18P35713 384 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 RBPJQ06330 500 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 LANCL3Q6ZV70 420 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 PRSS41Q7RTY9 318 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 TMEM68Q96MH6 324 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 TRAPPC2LQ9UL33 140 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 PIGLQ9Y2B2 252 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 COL11A2P13942 1736 aaPredicted RBP12.41□□□□□ -0.42
C9orf47-203ENST00000375851 PRSS37A4D1T9 235 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 UBBP0CG47 229 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 HOXB3P14651 431 aaPredicted RBP12.41□□□□□ -0.42
C9orf47-203ENST00000375851 CD53P19397 219 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 ETV6P41212 452 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 RPL23AP62750 156 aaKnown RBP12.41□□□□□ -0.42
C9orf47-203ENST00000375851 FBXW12Q6X9E4 464 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 USP51Q70EK9 711 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 OR13C5Q8NGS8 318 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 OR4C3Q8NH37 302 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 STK35Q8TDR2 534 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 ZG16BQ96DA0 208 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 WWTR1Q9GZV5 400 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 TXNIPQ9H3M7 391 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 C12orf49Q9H741 205 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 SLC22A11Q9NSA0 550 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 GPATCH2Q9NW75 528 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 GVINP1Q7Z2Y8 2422 aa12.41□□□□□ -0.42
C9orf47-203ENST00000375851 TRIOBPQ9H2D6 2365 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 NKX2-2O95096 273 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 SRP9P49458 86 aaKnown RBP12.4□□□□□ -0.42
C9orf47-203ENST00000375851 BDH1Q02338 343 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 AQP6Q13520 282 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 CDK5R1Q15078 307 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 HLA-BQ31612 363 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 CADM4Q8NFZ8 388 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 SMIM19Q96E16 107 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 YIPF6Q96EC8 236 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 NUDT9Q9BW91 350 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 ZNF436Q9C0F3 470 aaPredicted RBP12.4□□□□□ -0.42
C9orf47-203ENST00000375851 DYNLRB1Q9NP97 96 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 SHANK3Q9BYB0 1731 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 SOD1P00441 154 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 TPOP07202 933 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 S100PP25815 95 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 WDR88Q6ZMY6 472 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 GPR32P1Q8NGA4 272 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 GPBAR1Q8TDU6 330 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 ARHGDIGQ99819 225 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 SLC25A21Q9BQT8 299 aaPredicted RBP12.4□□□□□ -0.42
C9orf47-203ENST00000375851 CFHR5Q9BXR6 569 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 TAS2R4Q9NYW5 299 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 GLTPQ9NZD2 209 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 LRFN1Q9P244 771 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 CTSFQ9UBX1 484 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 DUSP13Q9UII6 198 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 PCDHGA5Q9Y5G8 931 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 CCDC163A0A0D9SF12 145 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 TIMM8AO60220 97 aaPredicted RBP12.4□□□□□ -0.42
C9orf47-203ENST00000375851 PCBP4P57723 403 aaKnown RBP12.4□□□□□ -0.42
C9orf47-203ENST00000375851 OTPQ5XKR4 325 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 DOK3Q7L591 496 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 VN1R4Q7Z5H5 301 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 SECTM1Q8WVN6 248 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.4□□□□□ -0.42
C9orf47-203ENST00000375851 GABRG3Q99928 467 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 MENTQ9BUN1 341 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 IL20Q9NYY1 176 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 LOXL2Q9Y4K0 774 aa12.4□□□□□ -0.42
C9orf47-203ENST00000375851 RAB31Q13636 194 aa12.4□□□□□ -0.43
C9orf47-203ENST00000375851 OR51E1Q8TCB6 317 aa12.4□□□□□ -0.43
C9orf47-203ENST00000375851 TTC9Q92623 222 aa12.4□□□□□ -0.43
C9orf47-203ENST00000375851 BANF2Q9H503 90 aa12.4□□□□□ -0.43
C9orf47-203ENST00000375851 NPAP1Q9NZP6 1156 aa12.4□□□□□ -0.43
C9orf47-203ENST00000375851 BOLA1Q9Y3E2 137 aa12.4□□□□□ -0.43
C9orf47-203ENST00000375851 E9PI62 339 aa12.39□□□□□ -0.43
C9orf47-203ENST00000375851 GABARAPH6UMI1 98 aa12.39□□□□□ -0.43
C9orf47-203ENST00000375851 ZNF780AO75290 641 aaPredicted RBP12.39□□□□□ -0.43
C9orf47-203ENST00000375851 CALCBP10092 127 aa12.39□□□□□ -0.43
C9orf47-203ENST00000375851 CCL7P80098 99 aa12.39□□□□□ -0.43
C9orf47-203ENST00000375851 ARF1P84077 181 aaKnown RBP12.39□□□□□ -0.43
C9orf47-203ENST00000375851 EIF4EBP2Q13542 120 aaPredicted RBP12.39□□□□□ -0.43
C9orf47-203ENST00000375851 ZNF169Q14929 603 aaPredicted RBP12.39□□□□□ -0.43
C9orf47-203ENST00000375851 OXA1LQ15070 435 aa12.39□□□□□ -0.43
C9orf47-203ENST00000375851 THEM4Q5T1C6 240 aa12.39□□□□□ -0.43
C9orf47-203ENST00000375851 MRGPRX4Q96LA9 322 aa12.39□□□□□ -0.43
C9orf47-203ENST00000375851 CNTNAP3BQ96NU0 1288 aa12.39□□□□□ -0.43
C9orf47-203ENST00000375851 ING1Q9UK53 422 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms