RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 GLT8D1Q68CQ7 371 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 JMJD6Q6NYC1 403 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ENPP7Q6UWV6 458 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 MOB3CQ70IA8 216 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF595Q8IYB9 648 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 GALNT16Q8N428 558 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 RCBTB1Q8NDN9 531 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 OR4C3Q8NH37 302 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 OR1E3Q8WZA6 343 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 C3orf49Q96BT1 292 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 CTHRC1Q96CG8 243 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 FOXN4Q96NZ1 517 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 MOGAT1Q96PD6 335 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 BARX1Q9HBU1 254 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-203ENST00000374877 ASF1BQ9NVP2 202 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 PLEKHA6Q9Y2H5 1048 aa10.03□□□□□ -0.8
CCDC40-203ENST00000374877 TRBV5-7A0A0A0MS05 114 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 TMEM212A6NML5 194 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 METTL12A8MUP2 240 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 EIF4E2O60573 245 aaKnown RBP10.02□□□□□ -0.8
CCDC40-203ENST00000374877 RDH16O75452 317 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 ITGB2P05107 769 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 DLSTP36957 453 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 CENPAP49450 140 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 TAS2R19P59542 299 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 TMEM205Q6UW68 189 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 CCDC36Q8IYA8 594 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 ANKRD9Q96BM1 317 aaPredicted RBP10.02□□□□□ -0.8
CCDC40-203ENST00000374877 TPSD1Q9BZJ3 242 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 ACTR10Q9NZ32 417 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 CPNE7Q9UBL6 633 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 GMEB2Q9UKD1 530 aa10.02□□□□□ -0.8
CCDC40-203ENST00000374877 CCDC163A0A0D9SF12 145 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 LOC100289279A0A1B0GTE1 492 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 ZNF98A6NK75 572 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 K7ESF4 209 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 PRKNO60260 465 aaPredicted RBP10.02□□□□□ -0.81
CCDC40-203ENST00000374877 ALOX12BO75342 701 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 ZNF432O94892 652 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 HLA-AP01891 365 aaKnown RBP10.02□□□□□ -0.81
CCDC40-203ENST00000374877 HLA-DQA2P01906 255 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 GP1BAP07359 652 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 CSRP1P21291 193 aaKnown RBP10.02□□□□□ -0.81
CCDC40-203ENST00000374877 CD27P26842 260 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 CTAG1AP78358 180 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 KIR2DS3Q14952 304 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 HAGHLQ6PII5 290 aaPredicted RBP10.02□□□□□ -0.81
CCDC40-203ENST00000374877 Q6ZSR6 202 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 CDC20BQ86Y33 519 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 CA13Q8N1Q1 262 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 PRSS35Q8N3Z0 413 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 KCNRGQ8N5I3 272 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 ADAT1Q9BUB4 502 aaKnown RBP10.02□□□□□ -0.81
CCDC40-203ENST00000374877 GRHPRQ9UBQ7 328 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 PCDHB10Q9UN67 800 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 OR14I1A6ND48 311 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 F5H0A9 414 aaPredicted RBP10.02□□□□□ -0.81
CCDC40-203ENST00000374877 BCL2L11O43521 198 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 ATG12O94817 140 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 RPS4XP62701 263 aaKnown RBP10.02□□□□□ -0.81
CCDC40-203ENST00000374877 DHRS2Q13268 280 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 SNTB1Q13884 538 aaKnown RBP10.02□□□□□ -0.81
CCDC40-203ENST00000374877 NKPD1Q17RQ9 610 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 CCDC157Q569K6 752 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 WDR38Q5JTN6 314 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 SLC35D2Q76EJ3 337 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 OR1S2Q8NGQ3 325 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 FLVCR1-AS1Q8TAF5 88 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 TSACCQ96A04 125 aaPredicted RBP10.02□□□□□ -0.81
CCDC40-203ENST00000374877 RBM18Q96H35 190 aaKnown RBP10.02□□□□□ -0.81
CCDC40-203ENST00000374877 AMELYQ99218 206 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 PCOLCE2Q9UKZ9 415 aa10.02□□□□□ -0.81
CCDC40-203ENST00000374877 SLC25A12O75746 678 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 ZNF28P17035 718 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 SDHAP31040 664 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 SCAND1P57086 179 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 PPIAP62937 165 aaKnown RBP10.01□□□□□ -0.81
CCDC40-203ENST00000374877 NR0B2Q15466 257 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 ISXQ2M1V0 245 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 PRAMEF17Q5VTA0 474 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 C11orf87Q6NUJ2 197 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 OR5M8Q8NGP6 311 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 GPX8Q8TED1 209 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 PPP1R1CQ8WVI7 109 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 WNT2BQ93097 391 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 CCDC3Q9BQI4 270 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 ALX4Q9H161 411 aaPredicted RBP10.01□□□□□ -0.81
CCDC40-203ENST00000374877 SYT4Q9H2B2 425 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 ZNF768Q9H5H4 540 aaKnown RBP10.01□□□□□ -0.81
CCDC40-203ENST00000374877 KCNG2Q9UJ96 466 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 SLC22A13Q9Y226 551 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 IGKV1D-42A0A075B6H8 117 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 SERINC4A6NH21 518 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 OR2AT4A6NND4 320 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 EFCAB7A8K855 629 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 H0Y8X5 98 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 GMFGO60234 142 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 CYB5AP00167 134 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 BDKRB2P30411 391 aa10.01□□□□□ -0.81
CCDC40-203ENST00000374877 KIR3DL2P43630 455 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms