RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 MFAP5Q13361 173 aa11.27□□□□□ -0.6
NPLOC4-202ENST00000374747 OPN5Q6U736 354 aa11.27□□□□□ -0.6
NPLOC4-202ENST00000374747 TMEM217Q8N7C4 229 aa11.27□□□□□ -0.6
NPLOC4-202ENST00000374747 UBQLN3Q9H347 655 aa11.27□□□□□ -0.6
NPLOC4-202ENST00000374747 CTSLP07711 333 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 POU2F2P09086 479 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 HSD17B7P56937 341 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 TESK1Q15569 626 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 ZNF836Q6ZNA1 936 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 OVCH1Q7RTY7 1134 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 PRICKLE2Q7Z3G6 844 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 LGI3Q8N145 548 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 OR51S1Q8NGJ8 323 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 AMDHD1Q96NU7 426 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 ABHD6Q9BV23 337 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 SEMA6CQ9H3T2 930 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 RPH3ALQ9UNE2 315 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 KLK8O60259 260 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 HPNP05981 417 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 GP2P55259 537 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 MEP1BQ16820 701 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 MANEAQ5SRI9 462 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 MISPQ8IVT2 679 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 ST8SIA4Q92187 359 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 C6orf106Q9H6K1 298 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 KCNIP2Q9NS61 270 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 ZNF629Q9UEG4 869 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 OR51B4Q9Y5P0 310 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 PLRG1O43660 514 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 RFX2P48378 723 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 ZP2Q05996 745 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 ERV3-1Q14264 604 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 C2orf76Q3KRA6 126 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 PPP1R3BQ86XI6 285 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 UBE2FQ969M7 185 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 GLIPR2Q9H4G4 154 aa11.27□□□□□ -0.61
NPLOC4-202ENST00000374747 OR2F2O95006 317 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 TXNDC12O95881 172 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 CD14P08571 375 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 OR13C7P0DN81 318 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 MMP11P24347 488 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 SLC6A12P48065 614 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 OR2F1Q13607 317 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 SLC10A1Q14973 349 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 FAM111BQ6SJ93 734 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 WDR88Q6ZMY6 472 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 GDPD3Q7L5L3 318 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 PRSS45Q7RTY3 260 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 TM4SF18Q96CE8 201 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 MRGPRX1Q96LB2 322 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 TUBB1Q9H4B7 451 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 MRPL33O75394 65 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 GLCEO94923 617 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 ITGB8P26012 769 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 NPBWR1P48145 328 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 NPY4RP50391 375 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 ZNF133P52736 654 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 CLDN17P56750 224 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 HSD17B8Q92506 261 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 NECAP2Q9NVZ3 263 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 TEAD1P28347 426 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 RAB11AP62491 216 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 PMPCAQ10713 525 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 TMEM176BQ3YBM2 270 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 TIGD3Q6B0B8 471 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 PLPP7Q8NBV4 271 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 OR4A16Q8NH70 328 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 TEX37Q96LM6 180 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 CCNL2Q96S94 520 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 TMEM43Q9BTV4 400 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 ZMAT3Q9HA38 289 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 YBX2Q9Y2T7 364 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 A8MVM7 634 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 F6UZH7 168 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 LGI1O95970 557 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 CALCBP10092 127 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 GABRA2P47869 451 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 SYT14P1Q58G82 188 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 TMEM196Q5HYL7 178 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 FAM58AQ8N1B3 248 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 PRSS35Q8N3Z0 413 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 ZNF511Q8NB15 262 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 CLEC1AQ8NC01 280 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 ZNF845Q96IR2 970 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 RNF32Q9H0A6 362 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 CHST8Q9H2A9 424 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 URGCP-MRPS24S4R325 110 aa11.26□□□□□ -0.61
NPLOC4-202ENST00000374747 TMEM221A6NGB7 291 aa11.25□□□□□ -0.61
NPLOC4-202ENST00000374747 RAF1P04049 648 aa11.25□□□□□ -0.61
NPLOC4-202ENST00000374747 YBX1P67809 324 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-202ENST00000374747 GCNT2Q8N0V5 402 aa11.25□□□□□ -0.61
NPLOC4-202ENST00000374747 HPSE2Q8WWQ2 592 aa11.25□□□□□ -0.61
NPLOC4-202ENST00000374747 FGGYQ96C11 551 aa11.25□□□□□ -0.61
NPLOC4-202ENST00000374747 ZNF707Q96C28 371 aaPredicted RBP11.25□□□□□ -0.61
NPLOC4-202ENST00000374747 MBOAT4Q96T53 435 aa11.25□□□□□ -0.61
NPLOC4-202ENST00000374747 CTRCQ99895 268 aa11.25□□□□□ -0.61
NPLOC4-202ENST00000374747 TLCD2A6NGC4 264 aa11.25□□□□□ -0.61
NPLOC4-202ENST00000374747 TUSC2O75896 110 aa11.25□□□□□ -0.61
NPLOC4-202ENST00000374747 APEHP13798 732 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms