RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 OR8B4Q96RC9 309 aa13.9□□□□□ -0.18
NIPAL3-204ENST00000374399 ABHD6Q9BV23 337 aa13.9□□□□□ -0.18
NIPAL3-204ENST00000374399 TMED9Q9BVK6 235 aa13.9□□□□□ -0.18
NIPAL3-204ENST00000374399 LDAHQ9H6V9 325 aa13.9□□□□□ -0.18
NIPAL3-204ENST00000374399 RCE1Q9Y256 329 aa13.9□□□□□ -0.18
NIPAL3-204ENST00000374399 FREM1Q5H8C1 2179 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 A0A1B0GVC2 190 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 TRDV1A0A1B0GX56 115 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 METTL15A6NJ78 407 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 ZNHIT1O43257 154 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 SULT1C4O75897 302 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 FGF9P31371 208 aaPredicted RBP13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 CSNK1A1P48729 337 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 ROM1Q03395 351 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 FOXL2NBQ6ZUU3 175 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 USP43Q70EL4 1123 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 LINGO2Q7L985 606 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 LINC00346Q8IVM7 164 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 FNDC9Q8TBE3 224 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 FNDC8Q8TC99 324 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 MAP6Q96JE9 813 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 DACH2Q96NX9 599 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 DCBLD2Q96PD2 775 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 SLIRPQ9GZT3 109 aaKnown RBP13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 EXOSC4Q9NPD3 245 aaKnown RBP13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 TMEM14AQ9Y6G1 99 aa13.89□□□□□ -0.19
NIPAL3-204ENST00000374399 SHISA3A0PJX4 238 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 GABRPO00591 440 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 SC5DO75845 299 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 CD53P19397 219 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 TGM4P49221 684 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 GBX2P52951 348 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 TAS2R43P59537 309 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 RPS11P62280 158 aaKnown RBP eCLIP13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 KCNMB1Q16558 191 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 CCDC58Q4VC31 144 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 C22orf42Q6IC83 251 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 SLC18B1Q6NT16 456 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 RPL22L1Q6P5R6 122 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 KCTD20Q7Z5Y7 419 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 EGFL6Q8IUX8 553 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 GHSRQ92847 366 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 SMIM19Q96E16 107 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 HDHD5Q9BXW7 423 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 EMC7Q9NPA0 242 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 PLSCR2Q9NRY7 297 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 CYB5R1Q9UHQ9 305 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 SSR3Q9UNL2 185 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 LHFPL6Q9Y693 200 aa13.88□□□□□ -0.19
NIPAL3-204ENST00000374399 A0A1B0GTH9 108 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 A0A1W2PPL8 197 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 PHYHO14832 338 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 SERPINB10P48595 397 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 SLC3A1Q07837 685 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 EIF2B1Q14232 305 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 TBR1Q16650 682 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 CORO6Q6QEF8 472 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 LRRN1Q6UXK5 716 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 ZNF454Q8N9F8 522 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 OR10S1Q8NGN2 331 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 OR6N1Q8NGY5 312 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 TBC1D15Q8TC07 691 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 NABP1Q96AH0 204 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 TMEM45BQ96B21 275 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 PPIL3Q9H2H8 161 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 ELOVL3Q9HB03 270 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 POLE4Q9NR33 117 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 PAQR5Q9NXK6 330 aaPredicted RBP13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 LHX6Q9UPM6 363 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 RAXQ9Y2V3 346 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 CD8B2A6NJW9 211 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 CD1AP06126 327 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 ADRB1P08588 477 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 CD8BP10966 210 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 ZNF823P16415 610 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 RPS19P39019 145 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 AAED1Q7RTV5 226 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 DCXRQ7Z4W1 244 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 ZNF679Q8IYX0 411 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 OR13C5Q8NGS8 318 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 OR52N5Q8NH56 324 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 ASB17Q8WXJ9 295 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 RGP1Q92546 391 aaPredicted RBP13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 INTS12Q96CB8 462 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 MRPL48Q96GC5 212 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 ABHD17AQ96GS6 310 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 PDCD1LG2Q9BQ51 273 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 TTYH2Q9BSA4 534 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 PRDM14Q9GZV8 571 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 EXO5Q9H790 373 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 BCO1Q9HAY6 547 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 FRRS1LQ9P0K9 344 aa13.87□□□□□ -0.19
NIPAL3-204ENST00000374399 MED12LQ86YW9 2145 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 DHHO43323 396 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 SRSF10O75494 262 aaKnown RBP13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 RPP14O95059 124 aaKnown RBP13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 TGM6O95932 706 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 HLA-DPB1P04440 258 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 KRT8P05787 483 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms