RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ZNF823P16415 610 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 RIDAP52758 137 aaKnown RBP14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 ART1P52961 327 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 CDK10Q15131 360 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 MFSD8Q8NHS3 518 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 OR5B2Q96R09 309 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 MNTQ99583 582 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 PPIEQ9UNP9 301 aaKnown RBP14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 D6RAR5 112 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 AKR7A2O43488 359 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 IGHMP01871 453 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 TDGF1P13385 188 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 CRABP1P29762 137 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 DCTDP32321 178 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 TCEAL6Q6IPX3 200 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 SLC26A10Q8NG04 563 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 OR52N5Q8NH56 324 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 TCEAL3Q969E4 200 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 MCHR2Q969V1 340 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 MED28Q9H204 178 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 SERINC1Q9NRX5 453 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 ING3Q9NXR8 418 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 ZNF222Q9UK12 451 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 AHCTF1Q8WYP5 2266 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 TNRC6BQ9UPQ9 1833 aaKnown RBP14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 KDM4BO94953 1096 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 DHFRP00374 187 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 CXCL3P19876 107 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 KCTD18Q6PI47 426 aaPredicted RBP14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 BIVMQ86UB2 503 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 WDR5BQ86VZ2 330 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 OR51A2Q8NGJ7 313 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 SPACA9Q96E40 222 aaPredicted RBP14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 KCNK17Q96T54 332 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 TAS2R4Q9NYW5 299 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 CGGBP1Q9UFW8 167 aaPredicted RBP14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 DHDHQ9UQ10 334 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 TAS2R20P59543 309 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 PCOLCEQ15113 449 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 TCTE3Q8IZS6 198 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 ASCC1Q8N9N2 400 aaKnown RBP14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 WDSUB1Q8N9V3 476 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 OR11H7Q8NGC8 314 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 GIMAP1Q8WWP7 306 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 ASB17Q8WXJ9 295 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 TTC9Q92623 222 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 MIB2Q96AX9 1013 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 HAVCR1Q96D42 359 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 OR10A4Q9H209 315 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 HRASLSQ9HDD0 168 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 B3GAT1Q9P2W7 334 aa14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 C19orf25Q9UFG5 118 aaPredicted RBP14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 GPN3Q9UHW5 284 aaPredicted RBP14.29□□□□□ -0.12
CNKSR1-202ENST00000374253 DCDC2BA2VCK2 349 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 KRT33AO76009 404 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 UMODP07911 640 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 CDAP32320 146 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 POU3F4P49335 361 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 DAP3P51398 398 aaKnown RBP14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 CCR9P51686 369 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 CLDN6P56747 220 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 FAPQ12884 760 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 MFAP5Q13361 173 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 TEX30Q5JUR7 227 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 ZNF227Q86WZ6 799 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 FCAMRQ8WWV6 532 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 JSRP1Q96MG2 331 aaPredicted RBP14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 NECAB3Q96P71 396 aaPredicted RBP14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 GHITMQ9H3K2 345 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 SEC61A2Q9H9S3 476 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 KLHL9Q9P2J3 617 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 STEAP1Q9UHE8 339 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 NUBP2Q9Y5Y2 271 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 A0A1W2PPL8 197 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 GSTZ1O43708 216 aaPredicted RBP14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 H2AFB2P0C5Z0 115 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 CALCBP10092 127 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 BTG1P62324 171 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 GUCA2AQ02747 115 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 ROM1Q03395 351 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 SPOCK1Q08629 439 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 TMEM176BQ3YBM2 270 aaPredicted RBP14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 CATSPERDQ86XM0 798 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 SLC22A8Q8TCC7 542 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 ASB5Q8WWX0 329 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 CMKLR1Q99788 373 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 EMC7Q9NPA0 242 aa14.28□□□□□ -0.12
CNKSR1-202ENST00000374253 CCDC163A0A0D9SF12 145 aa14.27□□□□□ -0.13
CNKSR1-202ENST00000374253 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.13
CNKSR1-202ENST00000374253 GABARAPH6UMI1 98 aa14.27□□□□□ -0.13
CNKSR1-202ENST00000374253 P2RY10O00398 339 aa14.27□□□□□ -0.13
CNKSR1-202ENST00000374253 FABP7O15540 132 aa14.27□□□□□ -0.13
CNKSR1-202ENST00000374253 MAB21L1Q13394 359 aa14.27□□□□□ -0.13
CNKSR1-202ENST00000374253 ST3GAL2Q16842 350 aa14.27□□□□□ -0.13
CNKSR1-202ENST00000374253 C5orf46Q6UWT4 87 aa14.27□□□□□ -0.13
CNKSR1-202ENST00000374253 BAIAP2L2Q6UXY1 529 aa14.27□□□□□ -0.13
CNKSR1-202ENST00000374253 OR2M3Q8NG83 312 aa14.27□□□□□ -0.13
CNKSR1-202ENST00000374253 OR4K17Q8NGC6 315 aa14.27□□□□□ -0.13
CNKSR1-202ENST00000374253 ST7LQ8TDW4 575 aa14.27□□□□□ -0.13
CNKSR1-202ENST00000374253 C11orf40Q8WZ69 217 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms