RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 A8MXK9 166 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 MCIDASD6RGH6 385 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 J3QLW9 94 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 ABCD4O14678 606 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 ARPC3O15145 178 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 TO15178 435 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 HIST1H1CP16403 213 aaKnown RBP12.83□□□□□ -0.35
HMGA1-203ENST00000374116 ZNF19P17023 458 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 LCN1P31025 176 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 RPL4P36578 427 aaKnown RBP12.83□□□□□ -0.35
HMGA1-203ENST00000374116 DCAF7P61962 342 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 DHODHQ02127 395 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 OC90Q02509 493 aaPredicted RBP12.83□□□□□ -0.35
HMGA1-203ENST00000374116 LGALS3BPQ08380 585 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 BTN1A1Q13410 526 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 CAMK2DQ13557 499 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 GGTLC2Q14390 218 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 P2RY14Q15391 338 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 CD226Q15762 336 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 APOOLQ6UXV4 268 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 CFAP77Q6ZQR2 320 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 ZNF441Q8N8Z8 693 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 OR5L2Q8NGL0 311 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 OR6M1Q8NGM8 313 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 OR2T4Q8NH00 348 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 OR4K13Q8NH42 304 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 NUBPLQ8TB37 319 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 C4orf36Q96KX1 117 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 LINC00052Q96N35 136 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 SIGLEC12Q96PQ1 595 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 HES7Q9BYE0 225 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 RNF32Q9H0A6 362 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 SCP2D1Q9UJQ7 156 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 NOSIPQ9Y314 301 aaKnown RBP12.83□□□□□ -0.35
HMGA1-203ENST00000374116 NUBP2Q9Y5Y2 271 aa12.83□□□□□ -0.35
HMGA1-203ENST00000374116 ELOA3DA6NLF2 546 aaPredicted RBP12.83□□□□□ -0.36
HMGA1-203ENST00000374116 OR6C76A6NM76 312 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 SCDO00767 359 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 HPGDSO60760 199 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 NCR1O76036 304 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 OR2T7P0C7T2 308 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 SULT1A3P0DMM9 295 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 SULT1A4P0DMN0 295 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 CD96P40200 585 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 PRPS1P60891 318 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 RPS4XP62701 263 aaKnown RBP12.83□□□□□ -0.36
HMGA1-203ENST00000374116 ARG2P78540 354 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 SKP2Q13309 424 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 IL18Q14116 193 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 ELOA3BQ3SY89 546 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 NHLRC3Q5JS37 347 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 ARL9Q6T311 187 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 IGSF10Q6WRI0 2623 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 ASB18Q6ZVZ8 466 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 TPRA1Q86W33 373 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 MS4A15Q8N5U1 240 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 TMEM156Q8N614 296 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 SDR9C7Q8NEX9 313 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 ELOA3Q8NG57 546 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 OR5T2Q8NGG2 359 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 OR2T27Q8NH04 317 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 OR8K3Q8NH51 312 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 CHD6Q8TD26 2715 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 GPX7Q96SL4 187 aaPredicted RBP12.83□□□□□ -0.36
HMGA1-203ENST00000374116 CNN2Q99439 309 aaKnown RBP12.83□□□□□ -0.36
HMGA1-203ENST00000374116 ZNF416Q9BWM5 594 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 NRIP3Q9NQ35 241 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 SDHAF2Q9NX18 166 aa12.83□□□□□ -0.36
HMGA1-203ENST00000374116 E9PI62 339 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 OIP5O43482 229 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 UTS2O95399 124 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 GYPBP06028 91 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 SSR4P51571 173 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 NRG3P56975 720 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 OR12D2P58182 307 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 ACTA2P62736 377 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 ACTG2P63267 376 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 MFAP5Q13361 173 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 PON3Q15166 354 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 SLC35D3Q5M8T2 416 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 DMKNQ6E0U4 476 aaPredicted RBP12.82□□□□□ -0.36
HMGA1-203ENST00000374116 MDGA2Q7Z553 956 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 FGD2Q7Z6J4 655 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 SYS1Q8N2H4 156 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 ABHD4Q8TB40 342 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 LIPHQ8WWY8 451 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 KCTD12Q96CX2 325 aaKnown RBP12.82□□□□□ -0.36
HMGA1-203ENST00000374116 OR51J1Q9H342 316 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 KLHL1Q9NR64 748 aa12.82□□□□□ -0.36
HMGA1-203ENST00000374116 PCDHGA9Q9Y5G4 932 aaKnown RBP12.82□□□□□ -0.36
HMGA1-203ENST00000374116 IGKV1D-42A0A075B6H8 117 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 ZNF98A6NK75 572 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 G3V3Y1 287 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 ZNF264O43296 627 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 TSPAN2O60636 221 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 ABCD3P28288 659 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 BTCP35070 178 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 HOXA1P49639 335 aaPredicted RBP12.81□□□□□ -0.36
HMGA1-203ENST00000374116 DIO1P49895 249 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 ZNF81P51508 661 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms