RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 KIR2DL3P43628 341 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 AGFG1P52594 562 aaKnown RBP7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 MLF1P58340 268 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 ACTBP60709 375 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 GRB2P62993 217 aaKnown RBP7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 ACTG1P63261 375 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 MYBPHQ13203 477 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 SRSF5Q13243 272 aaKnown RBP7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 EIF2B1Q14232 305 aaKnown RBP7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 OR7A5Q15622 319 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 NRN1LQ496H8 165 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 ZFP69Q49AA0 526 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 PDSS1Q5T2R2 415 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 PRAMEF17Q5VTA0 474 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 RSBN1Q5VWQ0 802 aaPredicted RBP7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 CD276Q5ZPR3 534 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 TMEM225Q6GV28 225 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 ANKRD16Q6P6B7 361 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 FAM198BQ6UWH4 519 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 C6orf15Q6UXA7 325 aaPredicted RBP7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 RPTNQ6XPR3 784 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 PGAP1Q75T13 922 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 FGD2Q7Z6J4 655 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 NR2C2APQ86WQ0 139 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 ESX1Q8N693 406 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 OR4M2Q8NGB6 313 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 OR51L1Q8NGJ5 315 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 OR5D14Q8NGL3 314 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 OR2AJ1Q8NGZ0 328 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 GRPEL2Q8TAA5 225 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 SLC7A6Q92536 515 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 CPNE2Q96FN4 548 aaPredicted RBP7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 POM121Q96HA1 1249 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 RADILQ96JH8 1075 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 PDCD1LG2Q9BQ51 273 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 ABHD6Q9BV23 337 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 RTN4RQ9BZR6 473 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 RANBP3Q9H6Z4 567 aaPredicted RBP7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 ELOVL3Q9HB03 270 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 POLE4Q9NR33 117 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 HPF1Q9NWY4 346 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 OCIAD1Q9NX40 245 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 CYB5R1Q9UHQ9 305 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 PTRH2Q9Y3E5 179 aaKnown RBP7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 ABCA7Q8IZY2 2146 aa7.81□□□□□ -1.16
SNRNP40-202ENST00000373720 LOC100289279A0A1B0GTE1 492 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 LOC390937A0A1W2PQ73 354 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 DHRS7CA6NNS2 312 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 ZNF878C9JN71 531 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 C11orf98E9PRG8 122 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 SULT2B1O00204 365 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 PRKNO60260 465 aaPredicted RBP7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 KRT33AO76009 404 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 TIAF1O95411 115 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 BPNT1O95861 308 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 EIF4EP06730 217 aaKnown RBP7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 H2BFMP0C1H6 154 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 UBBP0CG47 229 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 IFNGR1P15260 489 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 PTNP21246 168 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 AZGP1P25311 298 aaKnown RBP7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 SRD5A2P31213 254 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 MECP2P51608 486 aaKnown RBP7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 CLRN1P58418 232 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 NANOS3P60323 173 aaKnown RBP7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 RRAS2P62070 204 aaPredicted RBP7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 H3F3AP84243 136 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 POU3F1Q03052 451 aaPredicted RBP7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 FOXF1Q12946 379 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 ECH1Q13011 328 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 MAB21L1Q13394 359 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 ZMYND11Q15326 602 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 P2RY14Q15391 338 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 TATDN3Q17R31 274 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 PLA1AQ53H76 456 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 TMEM69Q5SWH9 247 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 C10orf128Q5T292 105 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 RTL6Q6ICC9 239 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 FAM199XQ6PEV8 388 aaPredicted RBP7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 TSSK4Q6SA08 328 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 NHLRC1Q6VVB1 395 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 BTN2A1Q7KYR7 527 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 LRRTM1Q86UE6 522 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 SNX29P2Q8IUI4 249 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 SERPINA12Q8IW75 414 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 GHDCQ8N2G8 530 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 NOXO1Q8NFA2 376 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 OR11G2Q8NGC1 345 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 OR1J4Q8NGS1 313 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 ZPLD1Q8TCW7 415 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 RHBDD1Q8TEB9 315 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 TSEN15Q8WW01 171 aaKnown RBP7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 ZNRF4Q8WWF5 429 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 AKAP1Q92667 903 aaKnown RBP eCLIP7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 YIPF5Q969M3 257 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 HYLS1Q96M11 299 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 SORCS2Q96PQ0 1159 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 GTPBP2Q9BX10 602 aaKnown RBP7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 GON7Q9BXV9 100 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 PPIL3Q9H2H8 161 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms