RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ST7LQ8TDW4 575 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 RBP7Q96R05 134 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 CDC6Q99741 560 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 DKKL1Q9UK85 242 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 SPATA2Q9UM82 520 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 CLEC4AQ9UMR7 237 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 SLC22A13Q9Y226 551 aa17.48■□□□□ 0.39
HDAC1-201ENST00000373548 A0A0G2JMM0 328 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 A0A1W2PPB8 328 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 A0A1W2PRS3 328 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 OR2M5A3KFT3 312 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 KIR3DP1A8MWS1 328 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 H3BSH0 61 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 AIPO00170 330 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 GPR171O14626 319 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 HRGP04196 525 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 SERPINA7P05543 415 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 PGA4P0DJD7 388 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 PGA3P0DJD8 388 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 CAMK2DQ13557 499 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 HES5Q5TA89 166 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 DCXRQ7Z4W1 244 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 GLB1L2Q8IW92 636 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 ESX1Q8N693 406 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 NOXO1Q8NFA2 376 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 LGALS14Q8TCE9 139 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 PPP1R14AQ96A00 147 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 TCF7L1Q9HCS4 588 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 SACM1LQ9NTJ5 587 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 RYDENQ9NUL5 291 aaKnown RBP17.47■□□□□ 0.39
HDAC1-201ENST00000373548 KLHL9Q9P2J3 617 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 V9GY05 133 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 AHCTF1Q8WYP5 2266 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 KNTC1P50748 2209 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 SLC43A1O75387 559 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 AQP8O94778 261 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 PMS2P2O95744 297 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 ADRA2CP18825 462 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 CD97P48960 835 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 DNASE1L1P49184 302 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 ACER2Q5QJU3 275 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 LRRTM1Q86UE6 522 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 UBE2J2Q8N2K1 259 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 ZNF671Q8TAW3 534 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 TMEM106AQ96A25 262 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 SLC25A44Q96H78 314 aaPredicted RBP17.47■□□□□ 0.39
HDAC1-201ENST00000373548 ABHD1Q96SE0 405 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 WACQ9BTA9 647 aa17.47■□□□□ 0.39
HDAC1-201ENST00000373548 TRAV8-7A0A075B6U6 113 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 LOC102725191A0A1B0GVB3 256 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 GALR2O43603 387 aaPredicted RBP17.46■□□□□ 0.39
HDAC1-201ENST00000373548 SRSF10O75494 262 aaKnown RBP17.46■□□□□ 0.39
HDAC1-201ENST00000373548 CBR3O75828 277 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 IGHG1P01857 330 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 RAF1P04049 648 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 CLRN1P58418 232 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 EIF3IQ13347 325 aaKnown RBP17.46■□□□□ 0.39
HDAC1-201ENST00000373548 THEM4Q5T1C6 240 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 TMEM164Q5U3C3 297 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 CATSPERDQ86XM0 798 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 C11orf40Q8WZ69 217 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 HPS1Q92902 700 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 SLITRK2Q9H156 845 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 GTF2A1LQ9UNN4 478 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 PCDHGA9Q9Y5G4 932 aaKnown RBP17.46■□□□□ 0.39
HDAC1-201ENST00000373548 NCKAP5O14513 1909 aa17.46■□□□□ 0.39
HDAC1-201ENST00000373548 ZNF43P17038 809 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 H3F3AP84243 136 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 OR6X1Q8NH79 312 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 PSMF1Q92530 271 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 MCHR2Q969V1 340 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 MMP28Q9H239 520 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 FBXL3Q9UKT7 428 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 PCNX2A6NKB5 2137 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 TERTO14746 1132 aaKnown RBP17.45■□□□□ 0.38
HDAC1-201ENST00000373548 P04436 131 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 ZNF17P17021 662 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 DLSTP36957 453 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 KIR2DL3P43628 341 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 MAP2K3P46734 347 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 SPEM2Q0P670 501 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 HES3Q5TGS1 186 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 PYHIN1Q6K0P9 492 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 CORO6Q6QEF8 472 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 ZNF227Q86WZ6 799 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 KIAA1549Q9HCM3 1950 aa17.45■□□□□ 0.38
HDAC1-201ENST00000373548 LANCL1O43813 399 aa17.44■□□□□ 0.38
HDAC1-201ENST00000373548 RAD1O60671 282 aa17.44■□□□□ 0.38
HDAC1-201ENST00000373548 LAP3P28838 519 aa17.44■□□□□ 0.38
HDAC1-201ENST00000373548 CARD17Q5XLA6 110 aa17.44■□□□□ 0.38
HDAC1-201ENST00000373548 ESPNLQ6ZVH7 1005 aa17.44■□□□□ 0.38
HDAC1-201ENST00000373548 HDDC2Q7Z4H3 204 aa17.44■□□□□ 0.38
HDAC1-201ENST00000373548 RAB43Q86YS6 212 aa17.44■□□□□ 0.38
HDAC1-201ENST00000373548 TSEN15Q8WW01 171 aaKnown RBP17.44■□□□□ 0.38
HDAC1-201ENST00000373548 ADAMTS14Q8WXS8 1223 aa17.44■□□□□ 0.38
HDAC1-201ENST00000373548 TRIM63Q969Q1 353 aa17.44■□□□□ 0.38
HDAC1-201ENST00000373548 PCDHGA1Q9Y5H4 931 aa17.44■□□□□ 0.38
HDAC1-201ENST00000373548 R4GMQ9 66 aa17.44■□□□□ 0.38
HDAC1-201ENST00000373548 PHF3Q92576 2039 aaKnown RBP17.44■□□□□ 0.38
HDAC1-201ENST00000373548 CLDN12P56749 244 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms