RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 TIMM10BQ9Y5J6 103 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 KPTNQ9Y664 436 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 AKR7A3O95154 331 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 CTRB1P17538 263 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 ADRA2CP18825 462 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 BTG1P62324 171 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 CTRB2Q6GPI1 263 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 MBOAT4Q96T53 435 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 CHST8Q9H2A9 424 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 GAB2Q9UQC2 676 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 CCL26Q9Y258 94 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 LGALS8O00214 317 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 TAAR5O14804 337 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 ST8SIA3O43173 380 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 CD1CP29017 333 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 DHRS4L2Q6PKH6 230 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 VRK3Q8IV63 474 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 OR4Q3Q8NH05 313 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 PKMYT1Q99640 499 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 DUSP22Q9NRW4 184 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 A3GALT2U3KPV4 340 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 TARM1B6A8C7 271 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 RAB27BO00194 218 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 AQP7O14520 342 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 ABCD4O14678 606 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 HS3ST1O14792 307 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 TAPBPO15533 448 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 EFSO43281 561 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 NPPBP16860 134 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 GPX2P18283 190 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 PAX6P26367 422 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 ARR3P36575 388 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 RFLNAQ6ZTI6 216 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 OR52H1Q8NGJ2 320 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 RBPMSQ93062 196 aaKnown RBP10.58□□□□□ -0.72
VCL-202ENST00000372755 SLCO1B1Q9Y6L6 691 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 SH2D1BO14796 132 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 FABP6P51161 128 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 TAS2R45P59539 299 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 SLC35A2P78381 396 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 EMC4Q5J8M3 183 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 SYT6Q5T7P8 510 aaPredicted RBP10.58□□□□□ -0.72
VCL-202ENST00000372755 FAM122CQ6P4D5 195 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 PLXDC2Q6UX71 529 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 SFT2D1Q8WV19 159 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 MED9Q9NWA0 146 aa10.58□□□□□ -0.72
VCL-202ENST00000372755 MN1Q10571 1320 aaPredicted RBP10.57□□□□□ -0.72
VCL-202ENST00000372755 MAGEB4O15481 346 aaPredicted RBP10.57□□□□□ -0.72
VCL-202ENST00000372755 LGI1O95970 557 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 LALBAP00709 142 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 ZNF85Q03923 595 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 ZNF740Q8NDX6 193 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 ISL2Q96A47 359 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 ZC3HAV1LQ96H79 300 aaKnown RBP10.57□□□□□ -0.72
VCL-202ENST00000372755 IP6K3Q96PC2 410 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 ZNF416Q9BWM5 594 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 PIPP12273 146 aaPredicted RBP10.57□□□□□ -0.72
VCL-202ENST00000372755 RTL8BQ17RB0 113 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 ZNF750Q32MQ0 723 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 KHDC1LQ5JSQ8 128 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 ZNF468Q5VIY5 522 aaPredicted RBP10.57□□□□□ -0.72
VCL-202ENST00000372755 OR1M1Q8NGA1 313 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 PFN4Q8NHR9 129 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 GPR173Q9NS66 373 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 CHRNA9Q9UGM1 479 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 ELLP55199 621 aaPredicted RBP10.57□□□□□ -0.72
VCL-202ENST00000372755 HSF1Q00613 529 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 LHFPL2Q6ZUX7 228 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 OR8U1Q8NH10 309 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 FAM122AQ96E09 287 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 FBXL4Q9UKA2 621 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 OR2A25A4D2G3 310 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 FAM166BA8MTA8 275 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 RAF1P04049 648 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 POLR2IP36954 125 aaKnown RBP10.57□□□□□ -0.72
VCL-202ENST00000372755 MRPL19P49406 292 aaKnown RBP10.57□□□□□ -0.72
VCL-202ENST00000372755 RAB35Q15286 201 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 ADGRG3Q86Y34 549 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 PLPP6Q8IY26 295 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 NANOGP1Q8N7R0 232 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 OR2A14Q96R47 310 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 TMEM129A0AVI4 362 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 PRRG2O14669 202 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 H2AFB1P0C5Y9 115 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 THNSL2Q86YJ6 484 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 SLC16A11Q8NCK7 471 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 JAM3Q9BX67 310 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 P2RY12Q9H244 342 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 PIGMQ9H3S5 423 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 HCSTQ9UBK5 93 aa10.57□□□□□ -0.72
VCL-202ENST00000372755 CGGBP1Q9UFW8 167 aaPredicted RBP10.57□□□□□ -0.72
VCL-202ENST00000372755 KAT6AQ92794 2004 aa10.56□□□□□ -0.72
VCL-202ENST00000372755 MMP11P24347 488 aa10.56□□□□□ -0.72
VCL-202ENST00000372755 SAXO2Q658L1 398 aa10.56□□□□□ -0.72
VCL-202ENST00000372755 OR10R2Q8NGX6 335 aa10.56□□□□□ -0.72
VCL-202ENST00000372755 OR51H1Q8NH63 302 aa10.56□□□□□ -0.72
VCL-202ENST00000372755 Q96M85 177 aa10.56□□□□□ -0.72
VCL-202ENST00000372755 C20orf27Q9GZN8 174 aa10.56□□□□□ -0.72
VCL-202ENST00000372755 ANKRD10Q9NXR5 420 aa10.56□□□□□ -0.72
VCL-202ENST00000372755 A0A087WZY1 265 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms