RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 FCN2Q15485 313 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 PPP1R35Q8TAP8 253 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLAMF9Q96A28 289 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 VAMP8Q9BV40 100 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 SRRQ9GZT4 340 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 IGHV3-20A0A0C4DH32 117 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 ADAM23O75077 832 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 PXT1Q8NFP0 134 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 CADM4Q8NFZ8 388 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 BAHD1Q8TBE0 780 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 SNX11Q9Y5W9 270 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 CXorf51AA0A1B0GTR3 108 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 TAS2R46P59540 309 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 ELAVL1Q15717 326 aaKnown RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 FAM109BQ6ICB4 259 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 SAT2Q96F10 170 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 CMSS1Q9BQ75 279 aaKnown RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 NMNAT2Q9BZQ4 307 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 FAM117AQ9C073 453 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 SOX21Q9Y651 276 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 PDZK1IP1Q13113 114 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 CNN3Q15417 329 aaKnown RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 SMAD2Q15796 467 aaKnown RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF684Q5T5D7 378 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 ASTLQ6HA08 431 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 SGCZQ96LD1 299 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 TEX101Q9BY14 249 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 WSB2Q9NYS7 404 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 OTOL1A6NHN0 477 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 APEX1P27695 318 aaKnown RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC16A14Q7RTX9 510 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 S100A7AQ86SG5 101 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 C1orf210Q8IVY1 113 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 CADM3Q8N126 398 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR6F1Q8NGZ6 308 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 SENP5Q96HI0 755 aaPredicted RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 CRLF2Q9HC73 371 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 B3GNT2Q9NY97 397 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 EXO1Q9UQ84 846 aaKnown RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 TMED7-TICAM2A0A0A6YYA0 188 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 GPR137BO60478 399 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 NTF3P20783 257 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 HABP2Q14520 560 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 RPS19BP1Q86WX3 136 aaKnown RBP12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 FRMD1Q8N878 549 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR6S1Q8NH40 331 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 OIT3Q8WWZ8 545 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 PKMYT1Q99640 499 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 SPAG8Q99932 426 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZPBPQ9BS86 351 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 CALHM2Q9HA72 323 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 TMED7Q9Y3B3 224 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 LIPGQ9Y5X9 500 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC22A7Q9Y694 548 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 IL9P15248 144 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 SIRPAP78324 504 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 ACVR1Q04771 509 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF750Q32MQ0 723 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR5M11Q96RB7 305 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF251Q9BRH9 671 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 GALNT9Q9HCQ5 603 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 TAS2R16Q9NYV7 291 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 FBXL2Q9UKC9 423 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 TPOP07202 933 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR10J4P0C629 311 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 PLA2G7Q13093 441 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 NXNL2Q5VZ03 156 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 VASNQ6EMK4 673 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR10K2Q6IF99 312 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 KMT5CQ86Y97 462 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF573Q86YE8 665 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 LRRC18Q8N456 261 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC24A4Q8NFF2 622 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC38A5Q8WUX1 472 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 MIB2Q96AX9 1013 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 MS4A6EQ96DS6 147 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC6A20Q9NP91 592 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 A0A0B4J203 849 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 LNP1A1A4G5 178 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 SURF4O15260 269 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 CALCBP10092 127 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 ATP5IP56385 69 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 SPEM2Q0P670 501 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 IQCJQ1A5X6 159 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 FAM209BQ5JX69 171 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 TMEM71Q6P5X7 295 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 ASCL4Q6XD76 172 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR52I1Q8NGK6 324 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR10Z1Q8NGY1 313 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 ABHD4Q8TB40 342 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 LGALS14Q8TCE9 139 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 RPP25Q9BUL9 199 aaKnown RBP12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 CXorf36Q9H7Y0 433 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 OBP2BQ9NPH6 170 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 RNF24Q9Y225 148 aa12.22□□□□□ -0.45
RAPGEF1-201ENST00000372189 TRDV1A0A1B0GX56 115 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 GFYI3L273 518 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 CEACAM5P06731 702 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 GABRR1P24046 479 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 LIPAP38571 399 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms