RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TRBV2A0A0J9YWF9 115 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 GPR171O14626 319 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 SLC43A1O75387 559 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 CLPXO76031 633 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 EDNRAP25101 427 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 GUCA1AP43080 201 aaPredicted RBP23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 ROM1Q03395 351 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 C10orf128Q5T292 105 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 LIPNQ5VXI9 398 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 OTPQ5XKR4 325 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 C22orf42Q6IC83 251 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 C20orf196Q8IYI0 205 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 ZNF679Q8IYX0 411 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 OR8B4Q96RC9 309 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 ABHD6Q9BV23 337 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 HDHD5Q9BXW7 423 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 MROQ9BYG7 248 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 KCNN2Q9H2S1 579 aa23.32■■□□□ 1.32
ATPAF1-202ENST00000371937 IGKV3D-15A0A087WSY6 115 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 MKRN2OSH3BPM6 223 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 RGS9O75916 674 aaPredicted RBP23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 ABHD16AO95870 558 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 AAED1Q7RTV5 226 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 RNF128Q8TEB7 428 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 ABHD3Q8WU67 409 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 GHSRQ92847 366 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 PGLYRP3Q96LB9 341 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 AMELYQ99218 206 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 LOC400499M0QZD8 3231 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 ZNF407Q9C0G0 2248 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 GABRPO00591 440 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 PSMB10P40306 273 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 GDI2P50395 445 aaKnown RBP23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 OR52N5Q8NH56 324 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 ZNF775Q96BV0 537 aaPredicted RBP23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 PRRG4Q9BZD6 226 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 SLCO1C1Q9NYB5 712 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 SPRR3Q9UBC9 169 aa23.31■■□□□ 1.32
ATPAF1-202ENST00000371937 UPK3AO75631 287 aa23.3■■□□□ 1.32
ATPAF1-202ENST00000371937 PEX19P40855 299 aa23.3■■□□□ 1.32
ATPAF1-202ENST00000371937 KCNMB1Q16558 191 aa23.3■■□□□ 1.32
ATPAF1-202ENST00000371937 KRT77Q7Z794 578 aa23.3■■□□□ 1.32
ATPAF1-202ENST00000371937 TMEM45BQ96B21 275 aa23.3■■□□□ 1.32
ATPAF1-202ENST00000371937 WDYHV1Q96HA8 205 aa23.3■■□□□ 1.32
ATPAF1-202ENST00000371937 DCBLD2Q96PD2 775 aa23.3■■□□□ 1.32
ATPAF1-202ENST00000371937 GALNT8Q9NY28 637 aa23.3■■□□□ 1.32
ATPAF1-202ENST00000371937 CCDC59Q9P031 241 aaKnown RBP23.3■■□□□ 1.32
ATPAF1-202ENST00000371937 EMC3Q9P0I2 261 aa23.3■■□□□ 1.32
ATPAF1-202ENST00000371937 CFAP47Q6ZTR5 3102 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 K7ENP7 123 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 GPRIN2O60269 458 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 RPP14O95059 124 aaKnown RBP23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 SERPINA3P01011 423 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 SOX6P35712 828 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 INO80CQ6PI98 192 aaPredicted RBP23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 LRRC69Q6ZNQ3 347 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 Q6ZS92 163 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 DCXRQ7Z4W1 244 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 RPS4Y2Q8TD47 263 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 ULBP2Q9BZM5 246 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 CYB5R1Q9UHQ9 305 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 DNAJC13O75165 2243 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 ACACAQ13085 2346 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 PHYHD1Q5SRE7 291 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 LRRN1Q6UXK5 716 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 ABHD4Q8TB40 342 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 SLIRPQ9GZT3 109 aaKnown RBP23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 ELOVL3Q9HB03 270 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 UGT2A1Q9Y4X1 527 aa23.29■■□□□ 1.32
ATPAF1-202ENST00000371937 DHHO43323 396 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 IL1AP01583 271 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 CDAP32320 146 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 ZNF84P51523 738 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 RNPS1Q15287 305 aaKnown RBP23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 DEGS2Q6QHC5 323 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 TMEM91Q6ZNR0 172 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 LINC00346Q8IVM7 164 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 FNDC9Q8TBE3 224 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 ST7LQ8TDW4 575 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 DACH2Q96NX9 599 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 RNF122Q9H9V4 155 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 B3GAT2Q9NPZ5 323 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 POLE4Q9NR33 117 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 PARPBPQ9NWS1 579 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 CAMK2AQ9UQM7 478 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 POLR1DQ9Y2S0 133 aa23.28■■□□□ 1.32
ATPAF1-202ENST00000371937 A0A1B0GVC2 190 aa23.27■■□□□ 1.32
ATPAF1-202ENST00000371937 CD8B2A6NJW9 211 aa23.27■■□□□ 1.32
ATPAF1-202ENST00000371937 ZNF254O75437 659 aa23.27■■□□□ 1.32
ATPAF1-202ENST00000371937 CD8BP10966 210 aa23.27■■□□□ 1.32
ATPAF1-202ENST00000371937 RIDAP52758 137 aaKnown RBP23.27■■□□□ 1.32
ATPAF1-202ENST00000371937 LINC00299Q6ZSB3 139 aa23.27■■□□□ 1.32
ATPAF1-202ENST00000371937 TBC1D15Q8TC07 691 aa23.27■■□□□ 1.32
ATPAF1-202ENST00000371937 RNF166Q96A37 237 aaPredicted RBP23.27■■□□□ 1.32
ATPAF1-202ENST00000371937 DCLRE1CQ96SD1 692 aaKnown RBP23.27■■□□□ 1.32
ATPAF1-202ENST00000371937 MED18Q9BUE0 208 aa23.27■■□□□ 1.32
ATPAF1-202ENST00000371937 NOSIPQ9Y314 301 aaKnown RBP23.27■■□□□ 1.32
ATPAF1-202ENST00000371937 NTF4P34130 210 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 RPS19P39019 145 aaKnown RBP23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 LSM6P62312 80 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms