RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 OR14L1PQ8NHC6 308 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 GNPDA2Q8TDQ7 276 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 OR5P2Q8WZ92 322 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 HOXB13Q92826 284 aaPredicted RBP13.31□□□□□ -0.28
LMO4-201ENST00000370542 RNFT2Q96EX2 444 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 ZNF764Q96H86 408 aaPredicted RBP13.31□□□□□ -0.28
LMO4-201ENST00000370542 FUZQ9BT04 418 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 OR51J1Q9H342 316 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 GHITMQ9H3K2 345 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 PLEKHF2Q9H8W4 249 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 GPATCH2Q9NW75 528 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 TVP23BQ9NYZ1 205 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 LIPT1Q9Y234 373 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 CACNG2Q9Y698 323 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 FLNAP21333 2647 aaKnown RBP13.31□□□□□ -0.28
LMO4-201ENST00000370542 PCNX3Q9H6A9 2034 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 MEIKINA0A087WXM9 373 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 TRBV4-1A0A0J9YWV2 114 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 A0A1B0GW55 424 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 A0A1W2PRG6 482 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 M0R129 80 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 TLX2O43763 284 aaPredicted RBP13.3□□□□□ -0.28
LMO4-201ENST00000370542 TNFSF13O75888 250 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 TGM6O95932 706 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 DUX4L2P0CJ85 424 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 DUX4L3P0CJ86 424 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 DUX4L4P0CJ87 422 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 DUX4L5P0CJ88 424 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 DUX4L6P0CJ89 424 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 DUX4L7P0CJ90 424 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 TNFRSF1BP20333 461 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 AHCYP23526 432 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 MAP3K8P41279 467 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 KCNJ5P48544 419 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 GIPRP48546 466 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 AGFG1P52594 562 aaKnown RBP13.3□□□□□ -0.28
LMO4-201ENST00000370542 DSCR4P56555 118 aaPredicted RBP13.3□□□□□ -0.28
LMO4-201ENST00000370542 EFNB1P98172 346 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 GNA13Q14344 377 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 GPR176Q14439 515 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 GANABQ14697 944 aaKnown RBP13.3□□□□□ -0.28
LMO4-201ENST00000370542 FCN2Q15485 313 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 COX20Q5RI15 118 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 HBMQ6B0K9 141 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 C16orf62Q7Z3J2 963 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 BIVMQ86UB2 503 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 CMIPQ8IY22 773 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 TEX47Q8TBZ9 253 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 RBPMSQ93062 196 aaKnown RBP13.3□□□□□ -0.28
LMO4-201ENST00000370542 NEURL3Q96EH8 262 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 GSX2Q9BZM3 304 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 PIGMQ9H3S5 423 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 GLIPR2Q9H4G4 154 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 NEUROD4Q9HD90 331 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 DUX4Q9UBX2 424 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 EDARQ9UNE0 448 aa13.3□□□□□ -0.28
LMO4-201ENST00000370542 A0A0A6YYJ9 748 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 A8MXE2 369 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 TSC22D2O75157 780 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 RGS9O75916 674 aaPredicted RBP13.29□□□□□ -0.28
LMO4-201ENST00000370542 LALBAP00709 142 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 CRHP06850 196 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 IFI30P13284 250 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 DPP4P27487 766 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 IL12BP29460 328 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 EVI2BP34910 448 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 MTNR1AP48039 350 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 PITPNBP48739 271 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 STARP49675 285 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 CLDN15P56746 228 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 FABP5Q01469 135 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 GINS1Q14691 196 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 SNAPC1Q16533 368 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 CDC73Q6P1J9 531 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 C1orf94Q6P1W5 598 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 TMEM65Q6PI78 240 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 ARIH2OSQ8N7S6 290 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 UXS1Q8NBZ7 420 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 OR2M3Q8NG83 312 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 LINC01560Q8TB33 94 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 ELP4Q96EB1 424 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 ARSGQ96EG1 525 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 LRR1Q96L50 414 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 CMTM3Q96MX0 182 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 AMDHD1Q96NU7 426 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 BBS4Q96RK4 519 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 THAP7Q9BT49 309 aaPredicted RBP13.29□□□□□ -0.28
LMO4-201ENST00000370542 LMF2Q9BU23 707 aaKnown RBP13.29□□□□□ -0.28
LMO4-201ENST00000370542 ANKRD19PQ9H560 264 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 ZNF224Q9NZL3 707 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 EXTL2Q9UBQ6 330 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 ZNF222Q9UK12 451 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 EXOGQ9Y2C4 368 aaKnown RBP13.29□□□□□ -0.28
LMO4-201ENST00000370542 SLC9A8Q9Y2E8 581 aa13.29□□□□□ -0.28
LMO4-201ENST00000370542 IGLV3-32A0A0A0MS00 114 aa13.28□□□□□ -0.28
LMO4-201ENST00000370542 RPS10-NUDT3A0A1W2PQS6 291 aa13.28□□□□□ -0.28
LMO4-201ENST00000370542 LINC01387J3KSC0 135 aa13.28□□□□□ -0.28
LMO4-201ENST00000370542 GABRPO00591 440 aa13.28□□□□□ -0.28
LMO4-201ENST00000370542 IL33O95760 270 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms