RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 ZER1Q7Z7L7 766 aa13.8□□□□□ -0.2
VMA21-202ENST00000370361 LRRC18Q8N456 261 aa13.8□□□□□ -0.2
VMA21-202ENST00000370361 ZFAND2BQ8WV99 257 aa13.8□□□□□ -0.2
VMA21-202ENST00000370361 GEMIN6Q8WXD5 167 aaKnown RBP13.8□□□□□ -0.2
VMA21-202ENST00000370361 TIMD4Q96H15 378 aa13.8□□□□□ -0.2
VMA21-202ENST00000370361 TPD52L3Q96J77 140 aa13.8□□□□□ -0.2
VMA21-202ENST00000370361 DIRC2Q96SL1 478 aa13.8□□□□□ -0.2
VMA21-202ENST00000370361 FNDC11Q9BVV2 318 aa13.8□□□□□ -0.2
VMA21-202ENST00000370361 NSRP1Q9H0G5 558 aaKnown RBP13.8□□□□□ -0.2
VMA21-202ENST00000370361 ANKRD19PQ9H560 264 aa13.8□□□□□ -0.2
VMA21-202ENST00000370361 DECR2Q9NUI1 292 aa13.8□□□□□ -0.2
VMA21-202ENST00000370361 METRNQ9UJH8 293 aa13.8□□□□□ -0.2
VMA21-202ENST00000370361 FZR1Q9UM11 496 aa13.8□□□□□ -0.2
VMA21-202ENST00000370361 IGHV1-69-2A0A0G2JMI3 117 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 PLSCR5A0PG75 271 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 LYNX1G3V0Z9 82 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 LYNX1P0DP58 116 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 GAAP10253 952 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 IFI30P13284 250 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 TNFRSF1BP20333 461 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 MYBPC1Q00872 1141 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 MBNL2Q5VZF2 373 aaKnown RBP13.79□□□□□ -0.2
VMA21-202ENST00000370361 C8orf82Q6P1X6 216 aaPredicted RBP13.79□□□□□ -0.2
VMA21-202ENST00000370361 SLC25A47Q6Q0C1 308 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 CPLX4Q7Z7G2 160 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 SLC15A3Q8IY34 581 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 PAQR4Q8N4S7 273 aaPredicted RBP13.79□□□□□ -0.2
VMA21-202ENST00000370361 OR1J1Q8NGS3 322 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 MOSPD2Q8NHP6 518 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 HDAC2Q92769 488 aaKnown RBP13.79□□□□□ -0.2
VMA21-202ENST00000370361 YIPF5Q969M3 257 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 NABP1Q96AH0 204 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 ELMOD3Q96FG2 381 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 POM121L2Q96KW2 1035 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 HOPXQ9BPY8 73 aaPredicted RBP13.79□□□□□ -0.2
VMA21-202ENST00000370361 FAM107BQ9H098 131 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 SAP30LQ9HAJ7 183 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 ELOVL3Q9HB03 270 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 CMTM6Q9NX76 183 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 A4GNTQ9UNA3 340 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 UGT2A1Q9Y4X1 527 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 TIMM10BQ9Y5J6 103 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 SVEP1Q4LDE5 3571 aa13.79□□□□□ -0.2
VMA21-202ENST00000370361 C12orf71A8MTZ7 269 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 CLDN25C9JDP6 229 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 DYNC1I1O14576 645 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 NCR1O76036 304 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 SLC2A10O95528 541 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 ADH4P08319 380 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 CCL2P13500 99 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 ZNF32P17041 273 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 ARHGDIAP52565 204 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 PRKCDQ05655 676 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 LAPTM4AQ15012 233 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 SGCAQ16586 387 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 HFEQ30201 348 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 HACD2Q6Y1H2 254 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 FOXL2NBQ6ZUU3 175 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 OAFQ86UD1 273 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 CYP4Z1Q86W10 505 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 ACOT11Q8WXI4 607 aaPredicted RBP13.78□□□□□ -0.2
VMA21-202ENST00000370361 EGLN1Q9GZT9 426 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 EFCAB1Q9HAE3 211 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 HIF1ANQ9NWT6 349 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 ZDHHC8Q9ULC8 765 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 NDRG4Q9ULP0 352 aaKnown RBP13.78□□□□□ -0.2
VMA21-202ENST00000370361 TMEM5Q9Y2B1 443 aa13.78□□□□□ -0.2
VMA21-202ENST00000370361 C5orf49A4QMS7 147 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 EFCAB9A8MZ26 197 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 SHOX2O60902 331 aaPredicted RBP13.77□□□□□ -0.21
VMA21-202ENST00000370361 CLPTM1O96005 669 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 COX5BP10606 129 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 MSR1P21757 451 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 GATA3P23771 443 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 MAGEB1P43366 347 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 ZNF81P51508 661 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 CTXN1P60606 82 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 GNGT1P63211 74 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 CCL8P80075 99 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 TOP3AQ13472 1001 aaPredicted RBP13.77□□□□□ -0.21
VMA21-202ENST00000370361 IFI44LQ53G44 452 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 ACSM5Q6NUN0 579 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 SHQ1Q6PI26 577 aaKnown RBP13.77□□□□□ -0.21
VMA21-202ENST00000370361 RRM2BQ7LG56 351 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 ICA1LQ8NDH6 482 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 RAB1CQ92928 201 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 COG8Q96MW5 612 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 OR2H1Q9GZK4 316 aa13.77□□□□□ -0.21
VMA21-202ENST00000370361 GMPR2Q9P2T1 348 aaKnown RBP13.77□□□□□ -0.21
VMA21-202ENST00000370361 J3QLI3 93 aa13.76□□□□□ -0.21
VMA21-202ENST00000370361 NME4O00746 187 aa13.76□□□□□ -0.21
VMA21-202ENST00000370361 GSTA4O15217 222 aa13.76□□□□□ -0.21
VMA21-202ENST00000370361 TPD52L2O43399 206 aaKnown RBP13.76□□□□□ -0.21
VMA21-202ENST00000370361 PNPP00491 289 aa13.76□□□□□ -0.21
VMA21-202ENST00000370361 CCNOP22674 350 aa13.76□□□□□ -0.21
VMA21-202ENST00000370361 PRDX6P30041 224 aa13.76□□□□□ -0.21
VMA21-202ENST00000370361 CDAP32320 146 aa13.76□□□□□ -0.21
VMA21-202ENST00000370361 LMO4P61968 165 aa13.76□□□□□ -0.21
VMA21-202ENST00000370361 PSG4Q00888 419 aa13.76□□□□□ -0.21
VMA21-202ENST00000370361 SCRN3Q0VDG4 424 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms