RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 PRAMEF27A3QJZ7 478 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 OR6C65A6NJZ3 312 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 B4DXG7 233 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 C4orf51C9J302 202 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 D6RAR5 112 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 G3V3Y1 287 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 AIPO00170 330 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 RGS13O14921 159 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 FCER2P06734 321 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 NGFRP08138 427 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 UBBP0CG47 229 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 PET100P0DJ07 73 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 MSR1P21757 451 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 GIFP27352 417 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 SOX18P35713 384 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 PTH2RP49190 550 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 DSCR4P56555 118 aaPredicted RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 TAS2R31P59538 309 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ACSM1Q08AH1 577 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 FUT5Q11128 374 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 MFAP5Q13361 173 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 DOC2BQ14184 412 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC17A1Q14916 467 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 BAK1Q16611 211 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 THSD4Q6ZMP0 1018 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM57BQ71RH2 274 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 Q7L0L9 218 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 PXKQ7Z7A4 578 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ATG4DQ86TL0 474 aaPredicted RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CCDC190Q86UF4 302 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CCDC71Q8IV32 467 aaPredicted RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 LINC00346Q8IVM7 164 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 SFTPA2Q8IWL1 248 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 KDM8Q8N371 416 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 OR4M1Q8NGD0 313 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 OR51T1Q8NGJ9 327 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 OR5L1Q8NGL2 311 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 OR5H2Q8NGV7 314 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 OR52N5Q8NH56 324 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 KCNG3Q8TAE7 436 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 TAAR8Q969N4 342 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CTHRC1Q96CG8 243 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CMTM3Q96MX0 182 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 TWSG1Q9GZX9 223 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 NUP50Q9UKX7 468 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 TRAPPC4Q9Y296 219 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 LOC100509620A0A075B734 347 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 FITM1A5D6W6 292 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 TTLL8A6PVC2 850 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 AKR7A2O43488 359 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF780AO75290 641 aaPredicted RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 STK17BO94768 372 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 IGHA1P01876 353 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CLUP10909 449 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 APLNRP35414 380 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 DLSTP36957 453 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 GDNFP39905 211 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 GZMKP49863 264 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC36A2Q495M3 483 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 PXDC1Q5TGL8 231 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 NPSR1Q6W5P4 371 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 OR6V1Q8N148 313 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 DTWD2Q8NBA8 298 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM3DQ96BQ1 224 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF501Q96CX3 271 aaPredicted RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 TSSK2Q96PF2 358 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CLCC1Q96S66 551 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 WDR54Q9H977 334 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CDH20Q9HBT6 801 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ADGRL4Q9HBW9 690 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 GLS2Q9UI32 602 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 FBXO4Q9UKT5 387 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 TBC1D24Q9ULP9 559 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 RCE1Q9Y256 329 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 KLF13Q9Y2Y9 288 aaPredicted RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 NOSIPQ9Y314 301 aaKnown RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CHST2Q9Y4C5 530 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ARPC4-TTLL3A0A0A6YYG9 625 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 TEX51A0A1B0GUA7 166 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 TRABD2BA6NFA1 517 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 HRO43593 1189 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 PLATP00750 562 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 C1QBP02746 253 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ANKRD34CP0C6C1 535 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 PSMB1P20618 241 aaKnown RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 HCCSP53701 268 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ATP1B3P54709 279 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 IGLV3-21P80748 117 aaPredicted RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 SKP2Q13309 424 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 SQSTM1Q13501 440 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 FCN2Q15485 313 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 SWI5Q1ZZU3 235 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ACTBL2Q562R1 376 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 FHL5Q5TD97 284 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CBLN3Q6UW01 205 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM198BQ6UWH4 519 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 GPR155Q7Z3F1 870 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ADGRE4PQ86SQ3 457 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms