RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 CCL2P13500 99 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 FPR3P25089 353 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 LAP3P28838 519 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 SDHAP31040 664 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 RRM2P31350 389 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 RPL4P36578 427 aaKnown RBP17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 LCN6P62502 163 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 PSG4Q00888 419 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 LOXL1Q08397 574 aaPredicted RBP17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 SGCAQ16586 387 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 C1orf94Q6P1W5 598 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 LRP11Q86VZ4 500 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 PRIMA1Q86XR5 153 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 FAM168AQ92567 244 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 MCUR1Q96AQ8 359 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 RASD2Q96D21 266 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 POM121L2Q96KW2 1035 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 WNT5BQ9H1J7 359 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 RNF121Q9H920 327 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 POLE4Q9NR33 117 aa17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 PRPF19Q9UMS4 504 aaKnown RBP17.65■□□□□ 0.42
SMNDC1-201ENST00000369592 LOC100509620A0A075B734 347 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 TEX13CA0A0J9YWL9 993 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 IMPA2O14732 288 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 ICMTO60725 284 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 ZNF250P15622 560 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 SLC25A16P16260 332 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 CTLA4P16410 223 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 APEX1P27695 318 aaKnown RBP17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 RPS23P62266 143 aaKnown RBP17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 KRR1Q13601 381 aaKnown RBP17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 SMARCD3Q6STE5 483 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 PTCHD4Q6ZW05 846 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 SYT9Q86SS6 491 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 ZCCHC24Q8N2G6 241 aaKnown RBP17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 OR4C15Q8NGM1 316 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 ZNF570Q96NI8 536 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 OR2H1Q9GZK4 316 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 NDEL1Q9GZM8 345 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 MAGIXQ9H6Y5 334 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 MYEF2Q9P2K5 600 aaKnown RBP17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 AURKCQ9UQB9 309 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 LYVE1Q9Y5Y7 322 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 FKBP7Q9Y680 259 aa17.64■□□□□ 0.41
SMNDC1-201ENST00000369592 IGLV3-9A0A075B6K5 115 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 ACOT8O14734 319 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 ARPC3O15145 178 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 SYNGR3O43761 229 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 KRT36O76013 467 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 GALK2Q01415 458 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 PLP2Q04941 152 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 RFX4Q33E94 735 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 ZNF770Q6IQ21 691 aaPredicted RBP17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 PGBD2Q6P3X8 592 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 ADCK1Q86TW2 530 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 OR1J2Q8NGS2 313 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 VRK1Q99986 396 aaPredicted RBP17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 WACQ9BTA9 647 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 ZNF416Q9BWM5 594 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 RAB1BQ9H0U4 201 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 MYOZ1Q9NP98 299 aaPredicted RBP17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 KRCC1Q9NPI7 259 aaPredicted RBP17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 IL20RAQ9UHF4 553 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 IER3IP1Q9Y5U9 82 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 MALRD1Q5VYJ5 2156 aa17.63■□□□□ 0.41
SMNDC1-201ENST00000369592 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.63■□□□□ 0.418e-7■■■■□ 23.4
SMNDC1-201ENST00000369592 IQCMA0A1B0GVH7 501 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 NDUFS8O00217 210 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 MSR1P21757 451 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 STOMP27105 288 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 WNT5AP41221 380 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 CDKN2AP42771 156 aaKnown RBP17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 PDLIM4P50479 330 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 UCP2P55851 309 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 TBC1D28Q2M2D7 210 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 UGT2A3Q6UWM9 527 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 TRPM8Q7Z2W7 1104 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 DHFR2Q86XF0 187 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 AKR7LQ8NHP1 331 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 NEU4Q8WWR8 484 aaPredicted RBP17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 TRIM15Q9C019 465 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 KCNN2Q9H2S1 579 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 OR52D1Q9H346 318 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 CDH20Q9HBT6 801 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 CCNB1IP1Q9NPC3 277 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 TIMM10BQ9Y5J6 103 aa17.62■□□□□ 0.41
SMNDC1-201ENST00000369592 LOC390937A0A1W2PQ73 354 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 XKRYO14609 159 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 OR10H3O60404 316 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 ADRA2AP08913 450 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 FAM157BP0CG42 384 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 GIFP27352 417 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 ERVS71-1P61550 626 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 HSF2Q03933 536 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 TSPAN31Q12999 210 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 KCNMB1Q16558 191 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 PGM2L1Q6PCE3 622 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 ASB9Q96DX5 294 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 CLPTM1LQ96KA5 538 aa17.61■□□□□ 0.41
SMNDC1-201ENST00000369592 SNX18Q96RF0 628 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms