RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TSPAN10Q9H1Z9 355 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-204ENST00000369530 ABCG5Q9H222 651 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 FGF21Q9NSA1 209 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 MMACHCQ9Y4U1 282 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 A0A0U1RQV5 110 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 TMEM129A0AVI4 362 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 M0QZK8 103 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 CLIC1O00299 241 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 NKX2-8O15522 239 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 DLEU1O43261 78 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 ERAL1O75616 437 aaKnown RBP6.19□□□□□ -1.42
CSDE1-204ENST00000369530 DIRAS1O95057 198 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 VIPP01282 170 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 TFP02787 698 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 ALDOBP05062 364 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 MTNR1BP49286 362 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 CCR9P51686 369 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 SMSP52788 366 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 HMGA2P52926 109 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 BIKQ13323 160 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 MED22Q15528 200 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 ABHD13Q7L211 337 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 OOSP2Q86WS3 158 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 OR6V1Q8N148 313 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 OR10K1Q8NGX5 313 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 OR5J2Q8NH18 312 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 THAP4Q8WY91 577 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 CXorf40BQ96DE9 158 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 MACROD1Q9BQ69 325 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 AIF1LQ9BQI0 150 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 EFCAB11Q9BUY7 163 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 MS4A8Q9BY19 250 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 GAL3ST2Q9H3Q3 398 aa6.19□□□□□ -1.42
CSDE1-204ENST00000369530 TESQ9UGI8 421 aaKnown RBP6.19□□□□□ -1.42
CSDE1-204ENST00000369530 A0A1B0GX78 115 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 HSBP1L1C9JCN9 74 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 AGRPO00253 132 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 KDM4BO94953 1096 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 LY86O95711 162 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 HPXP02790 462 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 SPARCP09486 303 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 C1GALT1C1LP0DN25 315 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 LAMP1P11279 417 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 CTSEP14091 401 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 PVRP15151 417 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 CLDN8P56748 225 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 TAS2R50P59544 299 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 PPIAP62937 165 aaKnown RBP6.18□□□□□ -1.42
CSDE1-204ENST00000369530 RPP30P78346 268 aaKnown RBP6.18□□□□□ -1.42
CSDE1-204ENST00000369530 MC1RQ01726 317 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 SLC9A5Q14940 896 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF626Q68DY1 528 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 GRHL2Q6ISB3 625 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 GLDNQ6ZMI3 551 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-204ENST00000369530 DGAT2L6Q6ZPD8 337 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 OR52P1PQ8NH57 321 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 SMIM8Q96KF7 97 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 OR1F2PQ96R84 312 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 SPACA1Q9HBV2 294 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 MMP25Q9NPA2 562 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 HRASLS2Q9NWW9 162 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 AHSPQ9NZD4 102 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 A0A087WUJ7 227 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 A8MWP6 167 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 TMEM229AB2RXF0 380 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 EMC8O43402 210 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 GKN3PP0CG01 181 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 AMD1P17707 334 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 MMP11P24347 488 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 MPZP25189 248 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 SOX3P41225 446 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 SSR2P43308 183 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 NPBWR1P48145 328 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 GNG10P50151 68 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 WNT3P56703 355 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 LSM6P62312 80 aaKnown RBP6.18□□□□□ -1.42
CSDE1-204ENST00000369530 RBX1P62877 108 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 IL18Q14116 193 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 GCNT6Q5T4J0 391 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 FNDC7Q5VTL7 733 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 DCXRQ7Z4W1 244 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 CAMKMTQ7Z624 323 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 TSEN54Q7Z6J9 526 aaKnown RBP6.18□□□□□ -1.42
CSDE1-204ENST00000369530 MRGPREQ86SM8 312 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 PEG10Q86TG7 708 aaKnown RBP6.18□□□□□ -1.42
CSDE1-204ENST00000369530 LAPTM4BQ86VI4 370 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF615Q8N8J6 731 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 OR4E2Q8NGC2 313 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 OR9Q1Q8NGQ5 310 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 DTD1Q8TEA8 209 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF721Q8TF20 911 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 RAB3CQ96E17 227 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 ARHGAP9Q9BRR9 750 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 JAM3Q9BX67 310 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 TAS2R16Q9NYV7 291 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 PCDHB11Q9Y5F2 797 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 GSAPA4D1B5 854 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 NAP1L6A6NFF2 107 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 H0YGG7 62 aa6.18□□□□□ -1.42
CSDE1-204ENST00000369530 SIGLEC5O15389 551 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms