RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TUBD1Q9UJT1 453 aa21.12■□□□□ 0.97
SNX3-203ENST00000368979 OR14I1A6ND48 311 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 UPK3AO75631 287 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 SULT1C4O75897 302 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 TGM6O95932 706 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 FCGR2AP12318 317 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 CELP19835 753 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 PCSK6P29122 969 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 CDAP32320 146 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 OR10H5Q8NGA6 315 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 GPR137Q96N19 417 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 TTYH2Q9BSA4 534 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 SEC61A2Q9H9S3 476 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 ZNF71Q9NQZ8 489 aaPredicted RBP21.11■□□□□ 0.97
SNX3-203ENST00000368979 POLE4Q9NR33 117 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 PTTG2Q9NZH5 202 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 ST6GALNAC2Q9UJ37 374 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 STUB1Q9UNE7 303 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 GRIP1Q9Y3R0 1128 aa21.11■□□□□ 0.97
SNX3-203ENST00000368979 METTL15A6NJ78 407 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 PSMD9O00233 223 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 SLC22A1O15245 554 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 GPX5O75715 221 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 YES1P07947 543 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 FAM87AP0C7U9 286 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 OR8G3PP0DMU2 310 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 PSMA1P25786 263 aaKnown RBP21.1■□□□□ 0.97
SNX3-203ENST00000368979 GABRA5P31644 462 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 CRYBB2P43320 205 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 GBX2P52951 348 aaPredicted RBP21.1■□□□□ 0.97
SNX3-203ENST00000368979 LSM3P62310 102 aaKnown RBP21.1■□□□□ 0.97
SNX3-203ENST00000368979 RPS25P62851 125 aaKnown RBP21.1■□□□□ 0.97
SNX3-203ENST00000368979 EIF2B1Q14232 305 aaKnown RBP21.1■□□□□ 0.97
SNX3-203ENST00000368979 SPCS2Q15005 226 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 RIPPLY2Q5TAB7 128 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 OR8B4Q96RC9 309 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 CHCHD6Q9BRQ6 235 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 ABHD6Q9BV23 337 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 GP6Q9HCN6 339 aa21.1■□□□□ 0.97
SNX3-203ENST00000368979 A0A1W2PPW3 197 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 ZNHIT1O43257 154 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 LRRTM2O43300 516 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 MRPL33O75394 65 aaKnown RBP21.09■□□□□ 0.97
SNX3-203ENST00000368979 KRT8P05787 483 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 VBP1P61758 197 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 NCS1P62166 190 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 ROM1Q03395 351 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 NFATC3Q12968 1075 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 RPTNQ6XPR3 784 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 FAM220AQ7Z4H9 259 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 FGD2Q7Z6J4 655 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 MCEMP1Q8IX19 187 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 GPR137CQ8N3F9 429 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 Q8NA96 180 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 OR52N5Q8NH56 324 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 ST7LQ8TDW4 575 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 RNF166Q96A37 237 aaPredicted RBP21.09■□□□□ 0.97
SNX3-203ENST00000368979 LINC00470Q9BZP3 86 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 CALHM2Q9HA72 323 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 B3GAT2Q9NPZ5 323 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 PARPBPQ9NWS1 579 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 CYB5R1Q9UHQ9 305 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 CLEC4AQ9UMR7 237 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 TPRP12270 2363 aaKnown RBP21.09■□□□□ 0.97
SNX3-203ENST00000368979 DNAJC13O75165 2243 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 HSPB2A8KAH6 182 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 OGG1O15527 345 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 PLPP2O43688 288 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 TMCC2O75069 709 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 WNT11O96014 354 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 TACSTD2P09758 323 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 ZNF84P51523 738 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 HSPB2Q16082 182 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 CCDC58Q4VC31 144 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 ZNF324BQ6AW86 544 aaPredicted RBP21.09■□□□□ 0.97
SNX3-203ENST00000368979 DMKNQ6E0U4 476 aaPredicted RBP21.09■□□□□ 0.97
SNX3-203ENST00000368979 FAM180AQ6UWF9 173 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 GDPGP1Q6ZNW5 385 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 LINGO2Q7L985 606 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 DCXRQ7Z4W1 244 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 LINC00346Q8IVM7 164 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 RPS4Y2Q8TD47 263 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 HAVCR2Q8TDQ0 301 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 NABP1Q96AH0 204 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 ALKBH3Q96Q83 286 aaPredicted RBP21.09■□□□□ 0.97
SNX3-203ENST00000368979 CENPOQ9BU64 300 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 SLCO5A1Q9H2Y9 848 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 EMC7Q9NPA0 242 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 SLCO1C1Q9NYB5 712 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 IKZF2Q9UKS7 526 aa21.09■□□□□ 0.97
SNX3-203ENST00000368979 DMXL2Q8TDJ6 3036 aa21.08■□□□□ 0.97
SNX3-203ENST00000368979 LOC100506127A0A0U1RQW1 187 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 EDNRAP25101 427 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 TGM4P49221 684 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 SIRPAP78324 504 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 MRPL28Q13084 256 aaKnown RBP21.08■□□□□ 0.96
SNX3-203ENST00000368979 CDK5R1Q15078 307 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 SOWAHCQ53LP3 525 aaPredicted RBP21.08■□□□□ 0.96
SNX3-203ENST00000368979 LIPNQ5VXI9 398 aa21.08■□□□□ 0.96
SNX3-203ENST00000368979 KCTD18Q6PI47 426 aaPredicted RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms