RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 ZNF32P17041 273 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 STOMP27105 288 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 GCH1P30793 250 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 MPV17P39210 176 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 TAS2R41P59536 307 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 FMODQ06828 376 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 CD47Q08722 323 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 SGCAQ16586 387 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 ZNF718Q3SXZ3 478 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 THEM4Q5T1C6 240 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 INTS11Q5TA45 600 aaKnown RBP8.79□□□□□ -1
CLRN3-201ENST00000368671 HDDC2Q7Z4H3 204 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 C1QL2Q7Z5L3 287 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 DPP10Q8N608 796 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 AKR7LQ8NHP1 331 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 MOSPD2Q8NHP6 518 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 SLC25A40Q8TBP6 338 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 FAM216AQ8WUB2 273 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 TMEM255BQ8WV15 326 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 IPCEF1Q8WWN9 437 aaPredicted RBP8.79□□□□□ -1
CLRN3-201ENST00000368671 RASSF5Q8WWW0 418 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 CCL17Q92583 94 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 HDAC2Q92769 488 aaKnown RBP8.79□□□□□ -1
CLRN3-201ENST00000368671 RAB1CQ92928 201 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 SGTBQ96EQ0 304 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 ELMOD3Q96FG2 381 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 JMJD8Q96S16 334 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 SLC6A7Q99884 636 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 GAL3ST1Q99999 423 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 RBM4Q9BWF3 364 aaKnown RBP8.79□□□□□ -1
CLRN3-201ENST00000368671 SUCNR1Q9BXA5 334 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 MRPL13Q9BYD1 178 aaKnown RBP8.79□□□□□ -1
CLRN3-201ENST00000368671 PCDHAC1Q9H158 963 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 KAT8Q9H7Z6 458 aaKnown RBP8.79□□□□□ -1
CLRN3-201ENST00000368671 NANOGQ9H9S0 305 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 C20orf141Q9NUB4 165 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 EIF3KQ9UBQ5 218 aaKnown RBP8.79□□□□□ -1
CLRN3-201ENST00000368671 TANC2Q9HCD6 1990 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 ANK2Q01484 3957 aa8.79□□□□□ -1
CLRN3-201ENST00000368671 DYSFO75923 2080 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 IGKV1D-43A0A0B4J1Z2 117 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 PLSCR5A0PG75 271 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 C5orf49A4QMS7 147 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 CENPBD1B2RD01 187 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 J3QLI3 93 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 MGRN1O60291 552 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 IGHA1P01876 353 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 WNT5AP41221 380 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 COMPP49747 757 aaPredicted RBP8.78□□□□□ -1
CLRN3-201ENST00000368671 GDI2P50395 445 aaKnown RBP8.78□□□□□ -1
CLRN3-201ENST00000368671 ARFIP2P53365 341 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 CRYBA2P53672 197 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 ERVK-25P63136 954 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 LCN2P80188 198 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 MRPS34P82930 218 aaKnown RBP8.78□□□□□ -1
CLRN3-201ENST00000368671 TOP3AQ13472 1001 aaPredicted RBP8.78□□□□□ -1
CLRN3-201ENST00000368671 VMACQ2NL98 169 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 TMEM255AQ5JRV8 349 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 C10orf128Q5T292 105 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 USP43Q70EL4 1123 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 ZNF101Q8IZC7 436 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 BPIFB2Q8N4F0 458 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 NANPQ8TBE9 248 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 TMEM239Q8WW34 195 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 C22orf15Q8WYQ4 148 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 NABP1Q96AH0 204 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 ZMYND19Q96E35 227 aaPredicted RBP8.78□□□□□ -1
CLRN3-201ENST00000368671 POM121L2Q96KW2 1035 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 ATP6V1G3Q96LB4 118 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 SEPHS2Q99611 448 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 OR2J1Q9GZK6 312 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 C7orf69Q9H7B7 122 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 SIAEQ9HAT2 523 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 UBAP1Q9NZ09 502 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 STX18Q9P2W9 335 aaKnown RBP8.78□□□□□ -1
CLRN3-201ENST00000368671 UGT2A1Q9Y4X1 527 aa8.78□□□□□ -1
CLRN3-201ENST00000368671 LOC100509620A0A075B734 347 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 ZSCAN5BA6NJL1 495 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 PIP5K1CO60331 668 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 RBM34P42696 430 aaKnown RBP8.77□□□□□ -1.01
CLRN3-201ENST00000368671 OR1E2P47887 323 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 LIMS1P48059 325 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 GZMMP51124 257 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 MMP15P51511 669 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 ZNF133P52736 654 aaPredicted RBP8.77□□□□□ -1.01
CLRN3-201ENST00000368671 PSG4Q00888 419 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 HNRNPA0Q13151 305 aaKnown RBP8.77□□□□□ -1.01
CLRN3-201ENST00000368671 PIN1Q13526 163 aaPredicted RBP8.77□□□□□ -1.01
CLRN3-201ENST00000368671 TTMPQ5BVD1 217 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 FAM209AQ5JX71 171 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 ARMC4Q5T2S8 1044 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 SLC25A47Q6Q0C1 308 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 UNQ6126/PRO20091Q6UXV3 157 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 RFPL4BQ6ZWI9 263 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 CCDC80Q76M96 950 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 ABHD4Q8TB40 342 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 KLF14Q8TD94 323 aaPredicted RBP8.77□□□□□ -1.01
CLRN3-201ENST00000368671 ST7LQ8TDW4 575 aa8.77□□□□□ -1.01
CLRN3-201ENST00000368671 GEMIN6Q8WXD5 167 aaKnown RBP8.77□□□□□ -1.01
CLRN3-201ENST00000368671 MARS2Q96GW9 593 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms