RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 HOXB1P14653 301 aaPredicted RBP12.13□□□□□ -0.47
TPM3-211ENST00000368531 MSR1P21757 451 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 GGT2P36268 569 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 PTDSS1P48651 473 aaKnown RBP12.13□□□□□ -0.47
TPM3-211ENST00000368531 CDC42P60953 191 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 RPS7P62081 194 aaKnown RBP12.13□□□□□ -0.47
TPM3-211ENST00000368531 GLO1Q04760 184 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 FAM27BQ5VT28 67 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 FBXW10Q5XX13 1052 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 ZNF787Q6DD87 383 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 B3GLCTQ6Y288 498 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 FOXL2NBQ6ZUU3 175 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 ZNF511Q8NB15 262 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 ACBD4Q8NC06 268 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 OR10H5Q8NGA6 315 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 NANOS1Q8WY41 292 aaKnown RBP12.13□□□□□ -0.47
TPM3-211ENST00000368531 FBXO17Q96EF6 278 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 HRASLS5Q96KN8 279 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 ZNF416Q9BWM5 594 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 NMNAT2Q9BZQ4 307 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 RACGAP1Q9H0H5 632 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 NOX3Q9HBY0 568 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 CCNB1IP1Q9NPC3 277 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 ZNF224Q9NZL3 707 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 H2AFY2Q9P0M6 372 aaPredicted RBP12.13□□□□□ -0.47
TPM3-211ENST00000368531 POLR1DQ9Y2S0 133 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 TENM4Q6N022 2769 aa12.13□□□□□ -0.47
TPM3-211ENST00000368531 USP9XQ93008 2570 aaPredicted RBP12.12□□□□□ -0.47
TPM3-211ENST00000368531 ARPC4-TTLL3A0A0A6YYG9 625 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 TFP02787 698 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 CELA3BP08861 270 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 ZNF32P17041 273 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 CRYGSP22914 178 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 FMO3P31513 532 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 IDH3GP51553 393 aaPredicted RBP12.12□□□□□ -0.47
TPM3-211ENST00000368531 RAB1AP62820 205 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 TEKQ02763 1124 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 HSF2Q03933 536 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 APOFQ13790 326 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 ENDOGQ14249 297 aaKnown RBP12.12□□□□□ -0.47
TPM3-211ENST00000368531 GSG1Q2KHT4 349 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 SLC36A2Q495M3 483 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 TMEM53Q6P2H8 277 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 CCDC36Q8IYA8 594 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 DHRSXQ8N5I4 330 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 SLC26A10Q8NG04 563 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 TMEM163Q8TC26 289 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 ZMYND19Q96E35 227 aaPredicted RBP12.12□□□□□ -0.47
TPM3-211ENST00000368531 PIK3IP1Q96FE7 263 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 PLPPR2Q96GM1 343 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 BOD1Q96IK1 185 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 RDH12Q96NR8 316 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 HEATR1Q9H583 2144 aaKnown RBP12.12□□□□□ -0.47
TPM3-211ENST00000368531 NGBQ9NPG2 151 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 OBP2BQ9NPH6 170 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 RASSF1Q9NS23 344 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 B3GNT2Q9NY97 397 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 AASSQ9UDR5 926 aa12.12□□□□□ -0.47
TPM3-211ENST00000368531 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
TPM3-211ENST00000368531 C12orf71A8MTZ7 269 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 SIAH2O43255 324 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 UBL3O95164 117 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 RAB36O95755 333 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 CLIC3O95833 236 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 CST2P09228 141 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 GAAP10253 952 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 CBR1P16152 277 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 ZNF823P16415 610 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 RPS27P42677 84 aaKnown RBP12.11□□□□□ -0.47
TPM3-211ENST00000368531 EFNB1P98172 346 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 RAB39AQ14964 217 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 NRN1LQ496H8 165 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 CORO6Q6QEF8 472 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 SEZ6L2Q6UXD5 910 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 LINC00346Q8IVM7 164 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 AKR7LQ8NHP1 331 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 CDADC1Q9BWV3 514 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 WDR76Q9H967 626 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 SLC24A3Q9HC58 644 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 MRPL22Q9NWU5 206 aaKnown RBP12.11□□□□□ -0.47
TPM3-211ENST00000368531 DNAJC27Q9NZQ0 273 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 KCNN3Q9UGI6 736 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 NDRG4Q9ULP0 352 aaKnown RBP12.11□□□□□ -0.47
TPM3-211ENST00000368531 DOPEY1Q5JWR5 2465 aa12.11□□□□□ -0.47
TPM3-211ENST00000368531 FLNCQ14315 2725 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 FASNP49327 2511 aaKnown RBP12.1□□□□□ -0.47
TPM3-211ENST00000368531 IGHV1-18A0A0C4DH31 117 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 DPRXA6NFQ7 191 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 DEFB108AA8MXU0 73 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 E9PQ18 207 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 GLCEO94923 617 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 SPARCP09486 303 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 GSTT1P30711 240 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 ARR3P36575 388 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 AQP4P55087 323 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 LSM6P62312 80 aaKnown RBP12.1□□□□□ -0.47
TPM3-211ENST00000368531 ADAM8P78325 824 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 BSPH1Q075Z2 132 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 KCNMB1Q16558 191 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 PABPC1L2AQ5JQF8 200 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms