RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SDHAP31040 664 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 MAGEA2P43356 314 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 RPS23P62266 143 aaKnown RBP16.28■□□□□ 0.2
CKS1B-203ENST00000368439 MS4A2Q01362 244 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 KRR1Q13601 381 aaKnown RBP16.28■□□□□ 0.2
CKS1B-203ENST00000368439 ENDOGQ14249 297 aaKnown RBP16.28■□□□□ 0.2
CKS1B-203ENST00000368439 TBC1D28Q2M2D7 210 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 LCN8Q6JVE9 175 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 DPY19L2P2Q6ZN68 376 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 POM121L2Q96KW2 1035 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 SYT3Q9BQG1 590 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 RAB1BQ9H0U4 201 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 WNT5BQ9H1J7 359 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 KCNN2Q9H2S1 579 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 CCNB1IP1Q9NPC3 277 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 KRCC1Q9NPI7 259 aaPredicted RBP16.28■□□□□ 0.2
CKS1B-203ENST00000368439 POLE4Q9NR33 117 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 TAS2R1Q9NYW7 299 aa16.28■□□□□ 0.2
CKS1B-203ENST00000368439 SONP18583 2426 aaKnown RBP16.27■□□□□ 0.2
CKS1B-203ENST00000368439 LOC100509620A0A075B734 347 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 IQCMA0A1B0GVH7 501 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 A0A1W2PPL8 197 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 INAFM1C9JVW0 142 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 ADRA2AP08913 450 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 FAM157BP0CG42 384 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 CTLA4P16410 223 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 MSR1P21757 451 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 FPR3P25089 353 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 PCSK6P29122 969 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 PDLIM4P50479 330 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 HMGA2P52926 109 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 PLP2Q04941 152 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 TRIM25Q14258 630 aaKnown RBP16.27■□□□□ 0.2
CKS1B-203ENST00000368439 MTX3Q5HYI7 312 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 GPR139Q6DWJ6 353 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 C1orf94Q6P1W5 598 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 SMARCD3Q6STE5 483 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 UGT2A3Q6UWM9 527 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 PTCHD4Q6ZW05 846 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 OR1J2Q8NGS2 313 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 AKR7LQ8NHP1 331 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 NEU4Q8WWR8 484 aaPredicted RBP16.27■□□□□ 0.2
CKS1B-203ENST00000368439 ZNF416Q9BWM5 594 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 OR2H1Q9GZK4 316 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 NDEL1Q9GZM8 345 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 C1orf21Q9H246 121 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 CDH20Q9HBT6 801 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 MYOZ1Q9NP98 299 aaPredicted RBP16.27■□□□□ 0.2
CKS1B-203ENST00000368439 VSX1Q9NZR4 365 aaPredicted RBP16.27■□□□□ 0.2
CKS1B-203ENST00000368439 FZR1Q9UM11 496 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 IER3IP1Q9Y5U9 82 aa16.27■□□□□ 0.2
CKS1B-203ENST00000368439 NDUFS8O00217 210 aa16.26■□□□□ 0.19
CKS1B-203ENST00000368439 XKRYO14609 159 aa16.26■□□□□ 0.19
CKS1B-203ENST00000368439 SYNGR3O43761 229 aa16.26■□□□□ 0.19
CKS1B-203ENST00000368439 CD5LO43866 347 aa16.26■□□□□ 0.19
CKS1B-203ENST00000368439 STOMP27105 288 aa16.26■□□□□ 0.19
CKS1B-203ENST00000368439 GSSP48637 474 aa16.26■□□□□ 0.19
CKS1B-203ENST00000368439 UCP2P55851 309 aa16.26■□□□□ 0.19
CKS1B-203ENST00000368439 ERVS71-1P61550 626 aa16.26■□□□□ 0.19
CKS1B-203ENST00000368439 HSF2Q03933 536 aa16.26■□□□□ 0.19
CKS1B-203ENST00000368439 MUC13Q9H3R2 512 aa16.26■□□□□ 0.19
CKS1B-203ENST00000368439 DYNLRB1Q9NP97 96 aa16.26■□□□□ 0.19
CKS1B-203ENST00000368439 PRPF19Q9UMS4 504 aaKnown RBP16.26■□□□□ 0.19
CKS1B-203ENST00000368439 LYVE1Q9Y5Y7 322 aa16.26■□□□□ 0.19
CKS1B-203ENST00000368439 IGLV3-9A0A075B6K5 115 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 LOC390937A0A1W2PQ73 354 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 OR10H3O60404 316 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 CLPTM1O96005 669 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 APEHP13798 732 aaKnown RBP16.25■□□□□ 0.19
CKS1B-203ENST00000368439 ZNF250P15622 560 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 APLNRP35414 380 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 WNT5AP41221 380 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 CDKN2AP42771 156 aaKnown RBP16.25■□□□□ 0.19
CKS1B-203ENST00000368439 ALDH3B1P43353 468 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 MAD2L1BPQ15013 274 aaPredicted RBP16.25■□□□□ 0.19
CKS1B-203ENST00000368439 TMEM249Q2WGJ8 235 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 RFX4Q33E94 735 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 RGS7BPQ6MZT1 257 aaPredicted RBP16.25■□□□□ 0.19
CKS1B-203ENST00000368439 PGBD2Q6P3X8 592 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 SYT9Q86SS6 491 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 DHFR2Q86XF0 187 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 OR4C15Q8NGM1 316 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 FANK1Q8TC84 345 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 FOXN4Q96NZ1 517 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 SYT4Q9H2B2 425 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 OR51B6Q9H340 312 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 OR52D1Q9H346 318 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 TPK1Q9H3S4 243 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 EMC7Q9NPA0 242 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 REV1Q9UBZ9 1251 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 TIMM10BQ9Y5J6 103 aa16.25■□□□□ 0.19
CKS1B-203ENST00000368439 M0R233 179 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 SOCS2O14508 198 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 ICMTO60725 284 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 KRT36O76013 467 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 STAMBPO95630 424 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 PPP1R3DO95685 299 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 DAOP14920 347 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 RAD52P43351 418 aa16.24■□□□□ 0.19
CKS1B-203ENST00000368439 NR4A2P43354 598 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms