RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 FOXN4Q96NZ1 517 aa19.4■□□□□ 0.7
ECHDC1-203ENST00000368291 TSSK2Q96PF2 358 aa19.4■□□□□ 0.7
ECHDC1-203ENST00000368291 NUAK2Q9H093 628 aa19.4■□□□□ 0.7
ECHDC1-203ENST00000368291 POLE4Q9NR33 117 aa19.4■□□□□ 0.7
ECHDC1-203ENST00000368291 ARRDC5A6NEK1 342 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 SLC16A7O60669 478 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 CST2P09228 141 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 THBS4P35443 961 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 ADIPOQQ15848 244 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 SWI5Q1ZZU3 235 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 Q5PR19 223 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 CLEC12AQ5QGZ9 265 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 SHEQ5VZ18 495 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 RPL13AP3Q6NVV1 102 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 VHLLQ6RSH7 139 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 UGT2A3Q6UWM9 527 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 HS3ST5Q8IZT8 346 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 OR4K13Q8NH42 304 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 NMNAT3Q96T66 252 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 FEVQ99581 238 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 NTN4Q9HB63 628 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 DNAJB9Q9UBS3 223 aa19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 COA3Q9Y2R0 106 aaPredicted RBP19.39■□□□□ 0.69
ECHDC1-203ENST00000368291 GNGT2O14610 69 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 IDH3BO43837 385 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 NDUFS7O75251 213 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 MSR1P21757 451 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 NR4A1P22736 598 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 CCNIQ14094 377 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 PABPC1L2AQ5JQF8 200 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 ZNF362Q5T0B9 420 aaPredicted RBP19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 KRT80Q6KB66 452 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 LEG1Q6P5S2 330 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 PRSS57Q6UWY2 283 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 CD300LDQ6UXZ3 194 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 PAQR4Q8N4S7 273 aaPredicted RBP19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 CPEB3Q8NE35 698 aaKnown RBP19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 SNX18Q96RF0 628 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 ZNF416Q9BWM5 594 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 CACNG6Q9BXT2 260 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 KCNN2Q9H2S1 579 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 ZNF442Q9H7R0 627 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 YY1AP1Q9H869 796 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 EMC7Q9NPA0 242 aa19.38■□□□□ 0.69
ECHDC1-203ENST00000368291 KHDRBS3O75525 346 aaKnown RBP19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 TIPRLO75663 272 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 MPZL1O95297 269 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 SOX14O95416 240 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 CCL2P13500 99 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 GSTM3P21266 225 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 ATP5J2P56134 94 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 PSG4Q00888 419 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 SNTB2Q13425 540 aaKnown RBP19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 DAG1Q14118 895 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 MSMPQ1L6U9 139 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 SLC35F1Q5T1Q4 408 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 C1orf146Q5VVC0 180 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 OTPQ5XKR4 325 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 CCDC121Q6ZUS5 278 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 OR6V1Q8N148 313 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 NPEPL1Q8NDH3 523 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 SLC30A7Q8NEW0 376 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 OR52L1Q8NGH7 329 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 DDOQ99489 341 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 WNT5BQ9H1J7 359 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 RERGLQ9H628 205 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 CCNB1IP1Q9NPC3 277 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 PDP1Q9P0J1 537 aaPredicted RBP19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 REV1Q9UBZ9 1251 aa19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 GDF2Q9UK05 429 aaPredicted RBP19.37■□□□□ 0.69
ECHDC1-203ENST00000368291 IGLV1-36A0A0B4J1U3 117 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 OR6C68A6NDL8 312 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 GPANK1O95872 356 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 OR4A8P0C604 315 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 APEX1P27695 318 aaKnown RBP19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 NOS3P29474 1203 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 SERPINF1P36955 418 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 GUCA1AP43080 201 aaPredicted RBP19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 YTHDF3Q7Z739 585 aaKnown RBP19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 JAZF1Q86VZ6 243 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 LNX2Q8N448 690 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 SDR9C7Q8NEX9 313 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 OR52E2Q8NGJ4 325 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 OR4Q3Q8NH05 313 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 AKR7LQ8NHP1 331 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 DUS3LQ96G46 650 aaKnown RBP19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 TMUB1Q9BVT8 246 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 TSSK6Q9BXA6 273 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 OR2H1Q9GZK4 316 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 ARMC1Q9NVT9 282 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 B9D1Q9UPM9 204 aa19.36■□□□□ 0.69
ECHDC1-203ENST00000368291 GPRIN2O60269 458 aa19.35■□□□□ 0.69
ECHDC1-203ENST00000368291 PRKACGP22612 351 aa19.35■□□□□ 0.69
ECHDC1-203ENST00000368291 HSF2Q03933 536 aa19.35■□□□□ 0.69
ECHDC1-203ENST00000368291 PLP2Q04941 152 aa19.35■□□□□ 0.69
ECHDC1-203ENST00000368291 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.35■□□□□ 0.69
ECHDC1-203ENST00000368291 COX10Q12887 443 aa19.35■□□□□ 0.69
ECHDC1-203ENST00000368291 SYT9Q86SS6 491 aa19.35■□□□□ 0.69
ECHDC1-203ENST00000368291 GLB1L2Q8IW92 636 aa19.35■□□□□ 0.69
ECHDC1-203ENST00000368291 TRMT61AQ96FX7 289 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms