RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 OMGP23515 440 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 NAA10P41227 235 aaPredicted RBP2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 UBE2AP49459 152 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 ZNF138P52744 262 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 CCNA1P78396 465 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 DEFB116Q30KQ4 102 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 PTPN20Q4JDL3 420 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 TMEM179Q6ZVK1 233 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 H2AFVQ71UI9 128 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 TMEM135Q86UB9 458 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 TTC5Q8N0Z6 440 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 LIX1Q8N485 282 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 FAM86B1Q8N7N1 296 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 PRELID2Q8N945 189 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 OR10G2Q8NGC3 310 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 STARD8Q92502 1023 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 BMFQ96LC9 184 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 SERPINB12Q96P63 405 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 NOX3Q9HBY0 568 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 ZNF629Q9UEG4 869 aaPredicted RBP2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 SHPKQ9UHJ6 478 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 CD84Q9UIB8 345 aa2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 CENPJQ9HC77 1338 aaPredicted RBP2.07□□□□□ -2.08
ECHDC1-201ENST00000368287 DOCK9Q9BZ29 2069 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 CABIN1Q9Y6J0 2220 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 IGLV1-36A0A0B4J1U3 117 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 TRAV39A0A0B4J263 110 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 LRRIQ3A6PVS8 624 aaPredicted RBP2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 INS-IGF2F8WCM5 200 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 TEX46H3BTG2 121 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 CHST1O43916 411 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 AIREO43918 545 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 ENTPD5O75356 428 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 FTH1P02794 183 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 RETP07949 1114 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 ACSM4P0C7M7 580 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 TROVE2P10155 538 aaKnown RBP eCLIP2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 ZNF24P17028 368 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 DCKP27707 260 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 GPX4P36969 197 aaPredicted RBP2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 CDKN2BP42772 138 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 CRISP1P54107 249 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 SLAQ13239 276 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 EIF4EBP1Q13541 118 aaPredicted RBP2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 IDI1Q13907 227 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 CLINT1Q14677 625 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 FAM83EQ2M2I3 478 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 HES5Q5TA89 166 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 RAET1LQ5VY80 246 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 ANKRD22Q5VYY1 191 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 CARD17Q5XLA6 110 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 FAM71E1Q6IPT2 247 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 CEMP1Q6PRD7 247 aaPredicted RBP2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 TEX43Q6ZNM6 134 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 FAM92BQ6ZTR7 304 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 CMTM1Q8IZ96 169 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 CYB561D1Q8N8Q1 229 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 C15orf56Q8N910 161 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 OR10J6PQ8NGY7 276 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 NRGNQ92686 78 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 FAM192AQ9GZU8 254 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 TMEM185BQ9H7F4 350 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 ZNF160Q9HCG1 818 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 LHX9Q9NQ69 397 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 NINLQ9Y2I6 1382 aa2.06□□□□□ -2.08
ECHDC1-201ENST00000368287 TCP11X1B4DZS4 312 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 C9JVG2 144 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 DYNC1I1O14576 645 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 AIM2O14862 343 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 CALM1P0DP23 149 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 CALM2P0DP24 149 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 CALM3P0DP25 149 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 CYB561P49447 251 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 TWF1Q12792 350 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 MAB21L1Q13394 359 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 ILKQ13418 452 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 RCAN2Q14206 197 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 ZNF726P1Q15940 193 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 UBE2SQ16763 222 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 REEP3Q6NUK4 255 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 TMEM220Q6QAJ8 160 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 METAP1DQ6UB28 335 aaPredicted RBP2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 PLET1Q6UQ28 207 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 CCDC73Q6ZRK6 1079 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 OAFQ86UD1 273 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 BBS5Q8N3I7 341 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 OR4A4PQ8NGN8 299 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 OR2L8Q8NGY9 312 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 OR4S2Q8NH73 311 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 CAPSLQ8WWF8 208 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 NEURL3Q96EH8 262 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 OR2A5Q96R48 311 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 C12orf10Q9HB07 376 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 NEK6Q9HC98 313 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 RETNQ9HD89 108 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 NECAP2Q9NVZ3 263 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 GOLT1BQ9Y3E0 138 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 USP47Q96K76 1375 aa2.05□□□□□ -2.08
ECHDC1-201ENST00000368287 IGHV5-51A0A0C4DH38 117 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 IGHV3-66A0A0C4DH42 116 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms