RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 STRADBQ9C0K7 418 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 ZNF700Q9H0M5 742 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 SLC25A18Q9H1K4 315 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 APMAPQ9HDC9 416 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 MRPL22Q9NWU5 206 aaKnown RBP12.57□□□□□ -0.4
USF1-202ENST00000368020 VDAC3Q9Y277 283 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 ALG5Q9Y673 324 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 A0A0B4J293 547 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 FAM172BPA6NC97 362 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 B4E171 279 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 ZNF354AO60765 605 aaPredicted RBP12.57□□□□□ -0.4
USF1-202ENST00000368020 IGHEP01854 428 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 NR2C1P13056 603 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 TSPAN7P41732 249 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 RRAS2P62070 204 aaPredicted RBP12.57□□□□□ -0.4
USF1-202ENST00000368020 MRPS15P82914 257 aaKnown RBP12.57□□□□□ -0.4
USF1-202ENST00000368020 BTBD16Q32M84 506 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 SLC36A2Q495M3 483 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 WDR38Q5JTN6 314 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 HES5Q5TA89 166 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 ARSKQ6UWY0 536 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 C16orf47Q6ZP98 133 aaPredicted RBP12.57□□□□□ -0.4
USF1-202ENST00000368020 SYT9Q86SS6 491 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 LRRTM1Q86UE6 522 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 CMTM4Q8IZR5 234 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 PRSS35Q8N3Z0 413 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 BMPERQ8N8U9 685 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 SLC26A10Q8NG04 563 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 M1APQ8TC57 530 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 HAVCR1Q96D42 359 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 RNF31Q96EP0 1072 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 LIN37Q96GY3 246 aaPredicted RBP12.57□□□□□ -0.4
USF1-202ENST00000368020 ZFP3Q96NJ6 502 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 GFI1Q99684 422 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 EMC3Q9P0I2 261 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 STEAP1Q9UHE8 339 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 CDV3Q9UKY7 258 aaKnown RBP12.57□□□□□ -0.4
USF1-202ENST00000368020 FOXJ3Q9UPW0 622 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 N6AMT1Q9Y5N5 214 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 MT-CO3P00414 261 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 IFNGR1P15260 489 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 FSTP19883 344 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 PTGDSP41222 190 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 POU3F1Q03052 451 aaPredicted RBP12.56□□□□□ -0.4
USF1-202ENST00000368020 EIF3IQ13347 325 aaKnown RBP12.56□□□□□ -0.4
USF1-202ENST00000368020 MELKQ14680 651 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 PCOLCEQ15113 449 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 TOMM20Q15388 145 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 THEM4Q5T1C6 240 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 ZNF704Q6ZNC4 412 aaPredicted RBP12.56□□□□□ -0.4
USF1-202ENST00000368020 TMPRSS12Q86WS5 348 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 OR10G3Q8NGC4 313 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 OR4K17Q8NGC6 315 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 FCAMRQ8WWV6 532 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 PMEPA1Q969W9 287 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 ARL5BQ96KC2 179 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 RBP7Q96R05 134 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 ABHD6Q9BV23 337 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 SLC17A5Q9NRA2 495 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 NUFIP1Q9UHK0 495 aaKnown RBP12.56□□□□□ -0.4
USF1-202ENST00000368020 POU2F3Q9UKI9 436 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 DHDHQ9UQ10 334 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 MRPS7Q9Y2R9 242 aaKnown RBP12.56□□□□□ -0.4
USF1-202ENST00000368020 HDGFL3Q9Y3E1 203 aa12.56□□□□□ -0.4
USF1-202ENST00000368020 IGHV1-45A0A0A0MS14 117 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 MEGF11A6BM72 1044 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 ACOT7O00154 380 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 RGS13O14921 159 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 LANCL1O43813 399 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 ISG15P05161 165 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 FTH1P19P0C7X4 201 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 DCTDP32321 178 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 KIR3DL2P43630 455 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 SOX2P48431 317 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 FOXL2P58012 376 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 SNTB2Q13425 540 aaKnown RBP12.55□□□□□ -0.4
USF1-202ENST00000368020 ZNF239Q16600 458 aaKnown RBP12.55□□□□□ -0.4
USF1-202ENST00000368020 CCDC157Q569K6 752 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 TMEM69Q5SWH9 247 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 DHRS13Q6UX07 377 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 FCRLAQ7L513 359 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 LINGO2Q7L985 606 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 NOXA1Q86UR1 476 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 CATSPERDQ86XM0 798 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 LIX1LQ8IVB5 337 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 GLB1L2Q8IW92 636 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 UEVLDQ8IX04 471 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 FADS6Q8N9I5 356 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 OR2M3Q8NG83 312 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 SYNPRQ8TBG9 265 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 MR1Q95460 341 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 SLC25A38Q96DW6 304 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 NIPAL2Q9H841 368 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 OR5V1Q9UGF6 321 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 CLEC4AQ9UMR7 237 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 COA3Q9Y2R0 106 aaPredicted RBP12.55□□□□□ -0.4
USF1-202ENST00000368020 R4GMQ9 66 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 FREM3P0C091 2139 aa12.55□□□□□ -0.4
USF1-202ENST00000368020 A0A0B4J203 849 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 KRT33AO76009 404 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms