RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZNF77Q15935 545 aa14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 CPEB2Q7Z5Q1 589 aaKnown RBP14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 FAM122AQ96E09 287 aa14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 SIRPB1O00241 398 aa14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 CHRM2P08172 466 aa14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 TAS2R45P59539 299 aa14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 RPS16P62249 146 aaKnown RBP14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 ZNF750Q32MQ0 723 aa14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 THNSL2Q86YJ6 484 aa14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 SEC22AQ96IW7 307 aa14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 ASB16Q96NS5 453 aa14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 MBNL1Q9NR56 388 aaKnown RBP14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 FBXL2Q9UKC9 423 aa14.4□□□□□ -0.1
NUCKS1-201ENST00000367142 ALDOCP09972 364 aaKnown RBP14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 VWA2Q5GFL6 755 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 ADGRF3Q8IZF5 1079 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 SUMF1Q8NBK3 374 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 ZNF740Q8NDX6 193 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 IDSB3KWA1 339 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 BPIFB3P59826 476 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 KDM8Q8N371 416 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 ARPC4-TTLL3A0A0A6YYG9 625 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 M0QYG6 137 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 ARHGAP33O14559 1287 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 SOD1P00441 154 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 CRYABP02511 175 aaKnown RBP14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 QDPRP09417 244 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 TACR1P25103 407 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 SHC1P29353 583 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 RFX2P48378 723 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 ADIRFQ15847 76 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 ZNF573Q86YE8 665 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 DEFB108BQ8NET1 73 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 OR10G3Q8NGC4 313 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 RNF141Q8WVD5 230 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 OR2A14Q96R47 310 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 SLC22A12Q96S37 553 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 LGI1O95970 557 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 HPNP05981 417 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 DAPP51397 102 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 PHYHD1Q5SRE7 291 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 ZNF511Q8NB15 262 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 PLPP7Q8NBV4 271 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 OR51H1Q8NH63 302 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 DHRS4Q9BTZ2 278 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 C5orf49A4QMS7 147 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 MAGEB1P43366 347 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 ERHP84090 104 aaKnown RBP14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 KDM4DQ6B0I6 523 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 VRK3Q8IV63 474 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 PLPP6Q8IY26 295 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 OR51F2Q8NH61 342 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 CMTM3Q96MX0 182 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 OR11A1Q9GZK7 315 aa14.39□□□□□ -0.11
NUCKS1-201ENST00000367142 METRNLQ641Q3 311 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 PLXDC2Q6UX71 529 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 DND1Q8IYX4 353 aaKnown RBP14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 NIPSNAP3BQ9BS92 247 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 DSCR3O14972 297 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 XRCC2O43543 280 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 NOVA1P51513 510 aaKnown RBP14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 IHHQ14623 411 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 PYCR3Q53H96 274 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 GABRG1Q8N1C3 465 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 BCORP1Q8N888 145 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 FOXQ1Q9C009 403 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 TAS2R5Q9NYW4 299 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 LRP6O75581 1613 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 M0R082 166 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 PMS2P2O95744 297 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 NPY4RP50391 375 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 ETFBKMTQ8IXQ9 262 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 XKRY2A2RUG3 117 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 TXLNGYQ9BZA5 131 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 TMEM38AQ9H6F2 299 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 EMC7Q9NPA0 242 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 BHLHE40O14503 412 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 GUSBP08236 651 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 PIPP12273 146 aaPredicted RBP14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 BTLAQ7Z6A9 289 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 FAM58AQ8N1B3 248 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 M1APQ8TC57 530 aa14.38□□□□□ -0.11
NUCKS1-201ENST00000367142 SLC22A20A6NK97 555 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 STMND1H3BQB6 276 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 THEM4Q5T1C6 240 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 FAM71E1Q6IPT2 247 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 ANKRD16Q6P6B7 361 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 SPRED1Q7Z699 444 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 NLRP8Q86W28 1048 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 CCDC74BQ96LY2 380 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 H0YIG0 161 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 Q6ZPB1 254 aaPredicted RBP14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 OR2T11Q8NH01 316 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 PFN4Q8NHR9 129 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 TECTBQ96PL2 329 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 LAT2Q9GZY6 243 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 FGF22Q9HCT0 170 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 GLULP15104 373 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 SRMP19623 302 aa14.37□□□□□ -0.11
NUCKS1-201ENST00000367142 ELLP55199 621 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms