RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 CT45A5P0DMU8 189 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 CT45A7P0DMV0 189 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 CALM1P0DP23 149 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 CALM2P0DP24 149 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 CALM3P0DP25 149 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 GZMAP12544 262 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 CNR1P21554 472 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 OMGP23515 440 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 CRISP1P54107 249 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 STXBP1P61764 594 aaKnown RBP2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 HMGCS1Q01581 520 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 SMARCB1Q12824 385 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 PRPSAP1Q14558 356 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 KCTD19Q17RG1 926 aaPredicted RBP2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 TMEM183BQ1AE95 376 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 CT45A1Q5HYN5 189 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 CCNJQ5T5M9 372 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 ANKRD22Q5VYY1 191 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 STUMQ69YW2 141 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 ZNF493Q6ZR52 646 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 ABHD13Q7L211 337 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 STRADAQ7RTN6 431 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 HDDC2Q7Z4H3 204 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 CMC1Q7Z7K0 106 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 TMEM183AQ8IXX5 376 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 STPG2Q8N412 459 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 MDS2Q8NDY4 140 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 OR2A1Q8NGT9 310 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 CT45A3Q8NHU0 189 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 GLYATL2Q8WU03 294 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 DNAJC1Q96KC8 554 aaKnown RBP2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 WFIKKN1Q96NZ8 548 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 TEKT3Q9BXF9 490 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 ANKRD60Q9BZ19 345 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 LYRM4Q9HD34 91 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 NYAP2Q9P242 653 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 DEC1Q9P2X7 70 aa2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 PRG3Q9Y2Y8 225 aaPredicted RBP2.48□□□□□ -2.01
RNU6-28P-201ENST00000362378 NFASCO94856 1347 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 A6NDX4 124 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 SUPT3HB4E1H0 165 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 PES1O00541 588 aaKnown RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 KMOO15229 486 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 SS18L1O75177 396 aaPredicted RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 AQP8O94778 261 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 CCNB2O95067 398 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 RAB3DO95716 219 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 PCCAP05165 728 aaPredicted RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 RALBP11234 206 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 MDKP21741 143 aaPredicted RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 CCT6AP40227 531 aaKnown RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 CXCL5P42830 114 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 RPS10P46783 165 aaKnown RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 CLDN8P56748 225 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 SLC7A9P82251 487 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 TRAM2Q15035 370 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 OR7A5Q15622 319 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 ZNF726P1Q15940 193 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 RSPO1Q2MKA7 263 aaPredicted RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 KRT71Q3SY84 523 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 PIGGQ5H8A4 983 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 BEX5Q5H9J7 111 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 PIP5KL1Q5T9C9 394 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 SPESP1Q6UW49 350 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 SH2D6Q7Z4S9 175 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 TMEM150AQ86TG1 271 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 JAGN1Q8N5M9 183 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 C8orf31Q8N9H6 132 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 Q8N9W7 124 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 TTC29Q8NA56 475 aaPredicted RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 OR51G1Q8NGK1 321 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 OR9G4Q8NGQ1 327 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 OR10J6PQ8NGY7 276 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 OR4S2Q8NH73 311 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 OR5K2Q8NHB8 316 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 GIMAP1Q8WWP7 306 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 TMEM158Q8WZ71 300 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 FAM3DQ96BQ1 224 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 SEH1LQ96EE3 360 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 OR5B12Q96R08 314 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 ZYG11BQ9C0D3 744 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 ACTR3CQ9C0K3 210 aaPredicted RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 CDC42EP4Q9H3Q1 356 aaKnown RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 CCNB1IP1Q9NPC3 277 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 KCNJ16Q9NPI9 418 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 MRPL22Q9NWU5 206 aaKnown RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 PEF1Q9UBV8 284 aaKnown RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 ZNF629Q9UEG4 869 aaPredicted RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 ST3GAL6Q9Y274 331 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 MRPS18BQ9Y676 258 aaKnown RBP2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 KCNE3Q9Y6H6 103 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 CROCCQ5TZA2 2017 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 CARMIL3Q8ND23 1372 aa2.47□□□□□ -2.01
RNU6-28P-201ENST00000362378 SMKR1H3BMG3 65 aa2.46□□□□□ -2.02
RNU6-28P-201ENST00000362378 TEX46H3BTG2 121 aa2.46□□□□□ -2.02
RNU6-28P-201ENST00000362378 NUPL2O15504 423 aaKnown RBP2.46□□□□□ -2.02
RNU6-28P-201ENST00000362378 AKR7A2O43488 359 aa2.46□□□□□ -2.02
RNU6-28P-201ENST00000362378 ICOSLGO75144 302 aa2.46□□□□□ -2.02
RNU6-28P-201ENST00000362378 FKBP6O75344 327 aa2.46□□□□□ -2.02
RNU6-28P-201ENST00000362378 CD160O95971 181 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms