RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SFTPDP35247 375 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 MLC1Q15049 377 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 PLPP6Q8IY26 295 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 TP53I13Q8NBR0 393 aaPredicted RBP12.77□□□□□ -0.37
SMC5-201ENST00000361138 RHOFQ9HBH0 211 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 C19orf53Q9UNZ5 99 aaPredicted RBP12.77□□□□□ -0.37
SMC5-201ENST00000361138 COL4A1P02462 1669 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 CDK5RAP2Q96SN8 1893 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 DUX1O43812 170 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 LAP3P28838 519 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 MEOX2P50222 304 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 BVESQ8NE79 360 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 CYB5R1Q9UHQ9 305 aa12.77□□□□□ -0.37
SMC5-201ENST00000361138 RBMS3Q6XE24 437 aaKnown RBP12.76□□□□□ -0.37
SMC5-201ENST00000361138 GPR32P1Q8NGA4 272 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 OR14L1PQ8NHC6 308 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 LHFPL5Q8TAF8 219 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 ZFPM2Q8WW38 1151 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 MMP26Q9NRE1 261 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 BRINP1O60477 761 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 KLK3P07288 261 aaPredicted RBP12.76□□□□□ -0.37
SMC5-201ENST00000361138 CD22P20273 847 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 METRNLQ641Q3 311 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 MED25Q71SY5 747 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 NUDT22Q9BRQ3 303 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 STRAPQ9Y3F4 350 aaKnown RBP12.76□□□□□ -0.37
SMC5-201ENST00000361138 SLX4Q8IY92 1834 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 SIGLEC6O43699 453 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 CSNK1A1P48729 337 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 MVDP53602 400 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 SRPXP78539 464 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 MAT1AQ00266 395 aaKnown RBP12.76□□□□□ -0.37
SMC5-201ENST00000361138 CST9Q5W186 159 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 PLCXD3Q63HM9 321 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 OGFOD3Q6PK18 319 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 DCXRQ7Z4W1 244 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 ANGPTL5Q86XS5 388 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 DND1Q8IYX4 353 aaKnown RBP12.76□□□□□ -0.37
SMC5-201ENST00000361138 PLEKHA3Q9HB20 300 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 PLEK2Q9NYT0 353 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 IL20Q9NYY1 176 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 ZMAT5Q9UDW3 170 aaKnown RBP12.76□□□□□ -0.37
SMC5-201ENST00000361138 SDHAP31040 664 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 GUCA2AQ02747 115 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 SFRP5Q5T4F7 317 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 MAMSTRQ6ZN01 415 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 OR2W3Q7Z3T1 314 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 LIMS2Q7Z4I7 341 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 PRSS35Q8N3Z0 413 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 GALNT16Q8N428 558 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 OR2G3Q8NGZ4 309 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 NECAP2Q9NVZ3 263 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 CDC14CA4D256 554 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 HMSDA8MTL9 139 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 TXNDC12O95881 172 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 DCAF7P61962 342 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 LGALSLQ3ZCW2 172 aaPredicted RBP12.76□□□□□ -0.37
SMC5-201ENST00000361138 NHLRC1Q6VVB1 395 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 CCDC71Q8IV32 467 aaPredicted RBP12.76□□□□□ -0.37
SMC5-201ENST00000361138 ZNF784Q8NCA9 323 aaPredicted RBP12.76□□□□□ -0.37
SMC5-201ENST00000361138 EDAQ92838 391 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 VN1R3Q9BXE9 311 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 HDAC8Q9BY41 377 aa12.76□□□□□ -0.37
SMC5-201ENST00000361138 TRBV5-3A0A0A0MS03 114 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 ABLIM3O94929 683 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 SYNGR4O95473 234 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 CHRM2P08172 466 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 CSF2RAP15509 400 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 CXCL3P19876 107 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 F2RL1P55085 397 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 GPR85P60893 370 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 RSPO2Q6UXX9 243 aaPredicted RBP12.75□□□□□ -0.37
SMC5-201ENST00000361138 PRR18Q8N4B5 295 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 LYRM4Q9HD34 91 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 B3GALT5Q9Y2C3 310 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 FBXO7Q9Y3I1 522 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 MT-CO2P00403 227 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 NME1P15531 152 aaKnown RBP12.75□□□□□ -0.37
SMC5-201ENST00000361138 FCGR2CP31995 323 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 CDONQ4KMG0 1287 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 EMC4Q5J8M3 183 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 C5orf46Q6UWT4 87 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 PCDHGA1Q9Y5H4 931 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 PHF1O43189 567 aaPredicted RBP12.75□□□□□ -0.37
SMC5-201ENST00000361138 CHRDQ9H2X0 955 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 ELF5Q9UKW6 265 aaPredicted RBP12.75□□□□□ -0.37
SMC5-201ENST00000361138 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 ZNF239Q16600 458 aaKnown RBP12.75□□□□□ -0.37
SMC5-201ENST00000361138 FBLIM1Q8WUP2 373 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 TMED7Q9Y3B3 224 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 HSPB2A8KAH6 182 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 RNASEK-C17orf49H0YIS7 233 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 GSTZ1O43708 216 aaPredicted RBP12.75□□□□□ -0.37
SMC5-201ENST00000361138 SULT1A3P0DMM9 295 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 SULT1A4P0DMN0 295 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 HOXB9P17482 250 aaPredicted RBP12.75□□□□□ -0.37
SMC5-201ENST00000361138 ATP1B3P54709 279 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 C21orf58P58505 322 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 MPPED2Q15777 294 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 HSPB2Q16082 182 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms