RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 CACNG6Q9BXT2 260 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 OR51J1Q9H342 316 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 BRD7Q9NPI1 651 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 SPATA2Q9UM82 520 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 WASF3Q9UPY6 502 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 NCKAP5O14513 1909 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 ZNF879B4DU55 563 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 PDCD5O14737 125 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 GSTZ1O43708 216 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 NOS1APO75052 506 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 ASAH2BP0C7U1 165 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 ADH6P28332 368 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 BTCP35070 178 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 SRP9P49458 86 aaKnown RBP11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 DSCR4P56555 118 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 RPS4XP62701 263 aaKnown RBP11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 DYRK1AQ13627 763 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 GGTLC2Q14390 218 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 TP53I3Q53FA7 332 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 DPY19L2P2Q6ZN68 376 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 SIAH3Q8IW03 269 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 SLC35F2Q8IXU6 374 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 C9orf62Q8N4C0 152 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 ZNF671Q8TAW3 534 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 SLC39A7Q92504 469 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 YIPF5Q969M3 257 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 SLC25A36Q96CQ1 311 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 ZFP3Q96NJ6 502 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 DKKL1Q9UK85 242 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 HIF3AQ9Y2N7 669 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 MRPS7Q9Y2R9 242 aaKnown RBP11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 APC2O95996 2303 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 TRBV2A0A0J9YWF9 115 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 ERVH48-1M5A8F1 160 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 CDK2AP1O14519 115 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 GPRIN2O60269 458 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 NPIPB7O75200 414 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 CBR3O75828 277 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 GYPBP06028 91 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 UCHL1P09936 223 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 FKBP2P26885 142 aaKnown RBP11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 DPP4P27487 766 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 HSF2Q03933 536 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 LTBQ06643 244 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 MFSD13AQ14CX5 517 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 GXYLT1Q4G148 440 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 CDONQ4KMG0 1287 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 OR5H6Q8NGV6 325 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 ZMYND19Q96E35 227 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 SCNM1Q9BWG6 230 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 NRIP3Q9NQ35 241 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 B3GNT2Q9NY97 397 aa11.8□□□□□ -0.52
SQSTM1-201ENST00000360718 A0A1B0GVI7 797 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 EFSO43281 561 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 OR6A2O95222 327 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 BGLAPP02818 100 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 CD3GP09693 182 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 H2AFB2P0C5Z0 115 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 SNRPBP14678 240 aaKnown RBP11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 ATF1P18846 271 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 IL11P20809 199 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 EDNRAP25101 427 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 GIFP27352 417 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 CD96P40200 585 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 SNTB2Q13425 540 aaKnown RBP11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 ALG10Q5BKT4 473 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 SLC35D3Q5M8T2 416 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 C3orf33Q6P1S2 294 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 LINC00696Q6ZRV3 163 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 BTN2A1Q7KYR7 527 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 SSX6Q7RTT6 188 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 OR6S1Q8NH40 331 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 OR4K13Q8NH42 304 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 PELI1Q96FA3 418 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 GNRHR2Q96P88 292 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 OR11A1Q9GZK7 315 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 DEPPQ9NTK1 212 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 SLC6A5Q9Y345 797 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 IER3IP1Q9Y5U9 82 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 MGAQ8IWI9 3026 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 PIEZO1Q92508 2521 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 KIAA1549Q9HCM3 1950 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 MCIDASD6RGH6 385 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 EFNA2O43921 213 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 HIST1H1CP16403 213 aaKnown RBP11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 CNR1P21554 472 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 AQP2P41181 271 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 OR3A3P47888 321 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 DNASE1L1P49184 302 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 DBPQ10586 325 aaPredicted RBP11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 TOMM20Q15388 145 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 UBE2NLQ5JXB2 153 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 SPINK14Q6IE38 97 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 SDR9C7Q8NEX9 313 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 OR8H1Q8NGG4 311 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 OR5M1Q8NGP8 315 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 OR56B4Q8NH76 319 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 POC1BQ8TC44 478 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 HAVCR2Q8TDQ0 301 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 SMAP2Q8WU79 429 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms