RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CNMDO75829 334 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 ABHD16AO95870 558 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 F13BP05160 661 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 CYC1P08574 325 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 ERHP84090 104 aaKnown RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 SPRYD7Q5W111 196 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 OR51S1Q8NGJ8 323 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 RPUSD4Q96CM3 377 aaKnown RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 CAPNS2Q96L46 248 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 WDR61Q9GZS3 305 aaKnown RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 SH2D7A6NKC9 451 aaPredicted RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 EDDM3BP56851 147 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 VRK2Q86Y07 508 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 ACRP10323 421 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 CCR7P32248 378 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 CLDN17P56750 224 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 WRAP73Q9P2S5 460 aaPredicted RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 EIF1BO60739 113 aaKnown RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 EIF1P41567 113 aaKnown RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 CLDN12P56749 244 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 OR5AP2Q8NGF4 316 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 FBXO27Q8NI29 283 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 EGLN1Q9GZT9 426 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 GSX1Q9H4S2 264 aaPredicted RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 PHIPQ8WWQ0 1821 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 YKT6O15498 198 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 FOXN4Q96NZ1 517 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 CMTM3Q96MX0 182 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 PTRH2Q9Y3E5 179 aaKnown RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 A0A0A6YYJ9 748 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 GPR31O00270 319 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 OR8G3PP0DMU2 310 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 SELEP16581 610 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 ITGB7P26010 798 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 PNPLA1Q8N8W4 532 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 HIST1H1TP22492 207 aaPredicted RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 NHLH1Q02575 133 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 NHLH2Q02577 135 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 GJC3Q8NFK1 279 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 H1FXQ92522 213 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 SLC35B4Q969S0 331 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 FAM72CH0Y354 149 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 GALR2O43603 387 aaPredicted RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 LRRC26Q2I0M4 334 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 FAM72AQ5TYM5 149 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 FAM72DQ6L9T8 149 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 FAM72BQ86X60 149 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 TRAPPC1Q9Y5R8 145 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 MEX3DQ86XN8 651 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 ABHD4Q8TB40 342 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 EPHX3Q9H6B9 360 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 PCDHGA9Q9Y5G4 932 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 GABRR3A8MPY1 467 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 DEFB110Q30KQ9 67 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF354AO60765 605 aaPredicted RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 RRADP55042 308 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 KDM4DQ6B0I6 523 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 OR5D18Q8NGL1 313 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 OR52N1Q8NH53 320 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 GPR78Q96P69 363 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 NXT1Q9UKK6 140 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 B3GALT5Q9Y2C3 310 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 PRAMEF26H0Y7S4 382 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 CNN1P51911 297 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 ALKBH1Q13686 389 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 ELOBQ15370 118 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF787Q6DD87 383 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 OR52I1Q8NGK6 324 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 DIMT1Q9UNQ2 313 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 AQP7P3A6NL99 342 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 ARPC3O15145 178 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 STC2O76061 302 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 GPR12P47775 334 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 GABREP78334 506 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 SSBP1Q04837 148 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 USP53Q70EK8 1073 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 PCNPQ8WW12 178 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 LHX4Q969G2 390 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 FBXW5Q969U6 566 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 ZCWPW2A0A1B0GU75 182 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 M0QZK8 103 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 GGCTO75223 188 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 SULT1A3P0DMM9 295 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 SULT1A4P0DMN0 295 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 ELAVL4P26378 380 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 SNRPGP62308 76 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 DSC1Q08554 894 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 NECTIN4Q96NY8 510 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 NOSIPQ9Y314 301 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 ZP3P21754 424 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 PSMB6P28072 239 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 GPM6AP51674 278 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 PLPP7Q8NBV4 271 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 MED20Q9H944 212 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 ICE1Q9Y2F5 2266 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 CBARPQ8N350 705 aaPredicted RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 SNX11Q9Y5W9 270 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 FKBP2P26885 142 aaKnown RBP8.57□□□□□ -1.04
VPS13A-203ENST00000360280 SPCS3P61009 180 aa8.57□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF845Q96IR2 970 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms