RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 LRRTM1Q86UE6 522 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 SLC39A11Q8N1S5 342 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 C17orf78Q8N4C9 275 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 OR6K3Q8NGY3 331 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 DPH3Q96FX2 82 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 KLF16Q9BXK1 252 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-201ENST00000358694 SLC46A2Q9BY10 475 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 GPR55Q9Y2T6 319 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-201ENST00000358694 GOLGA4Q13439 2230 aaKnown RBP8.16□□□□□ -1.1
CTNND1-201ENST00000358694 TLCD2A6NGC4 264 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 CYBAP13498 195 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 RBP2P50120 134 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 FOXA1P55317 472 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 SUMO1P63165 101 aaKnown RBP8.16□□□□□ -1.1
CTNND1-201ENST00000358694 HTRA4P83105 476 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-201ENST00000358694 ALKBH1Q13686 389 aaKnown RBP8.16□□□□□ -1.1
CTNND1-201ENST00000358694 DHRS7BQ6IAN0 325 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-201ENST00000358694 PRSS35Q8N3Z0 413 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 NKAIN3Q8N8D7 197 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 ST8SIA4Q92187 359 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 SEH1LQ96EE3 360 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 CHRDL1Q9BU40 450 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 FOXQ1Q9C009 403 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 ACTR3CQ9C0K3 210 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-201ENST00000358694 TAF9BQ9HBM6 251 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 SPACA1Q9HBV2 294 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 AK3Q9UIJ7 227 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 USP22Q9UPT9 525 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 TIMM10BQ9Y5J6 103 aa8.16□□□□□ -1.1
CTNND1-201ENST00000358694 A0A096LPE4 126 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 A0A1W2PPZ6 126 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 TOX4O94842 621 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 TNFSF15O95150 251 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 BMP2P12643 396 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 SRP9P49458 86 aaKnown RBP8.15□□□□□ -1.1
CTNND1-201ENST00000358694 ZNF140P52738 457 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-201ENST00000358694 H1FNTQ75WM6 255 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-201ENST00000358694 MRPL10Q7Z7H8 261 aaKnown RBP8.15□□□□□ -1.1
CTNND1-201ENST00000358694 SFTPA2Q8IWL1 248 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 SFTPA1Q8IWL2 248 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 PXT1Q8NFP0 134 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 OR10R2Q8NGX6 335 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 GHSRQ92847 366 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 XYLT2Q9H1B5 865 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 OR51I2Q9H344 312 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 DLL4Q9NR61 685 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 FBXO34Q9NWN3 711 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 DNPH1O43598 174 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 TBXA2RP21731 343 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 CCR7P32248 378 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 CASP3P42574 277 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 ZNF239Q16600 458 aaKnown RBP8.15□□□□□ -1.1
CTNND1-201ENST00000358694 C1orf140Q5VVS0 124 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 VASH2Q86V25 355 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 SARGQ9BW04 601 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 ZNF586Q9NXT0 402 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 PPT2Q9UMR5 302 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 RIMBP3CA6NJZ7 1639 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 RIMBP3BA6NNM3 1639 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 RIMBP3Q9UFD9 1639 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 LOC100289279A0A1B0GTE1 492 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 TMEM235A6NFC5 223 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 G3V3Q6 166 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 CNMDO75829 334 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 SULT1C4O75897 302 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 OR5H8P0DN80 308 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 PSMB1P20618 241 aaKnown RBP8.15□□□□□ -1.1
CTNND1-201ENST00000358694 ZNF85Q03923 595 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 DHRS11Q6UWP2 260 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 FA2HQ7L5A8 372 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 TP53INP2Q8IXH6 220 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 RDH5Q92781 318 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 FAM3DQ96BQ1 224 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 ADAM29Q9UKF5 820 aa8.15□□□□□ -1.1
CTNND1-201ENST00000358694 COA3Q9Y2R0 106 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-201ENST00000358694 ZC3H13Q5T200 1668 aaKnown RBP8.15□□□□□ -1.11
CTNND1-201ENST00000358694 RIMS1Q86UR5 1692 aaKnown RBP8.15□□□□□ -1.11
CTNND1-201ENST00000358694 CIDEAO60543 219 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 RACK1P63244 317 aaKnown RBP8.15□□□□□ -1.11
CTNND1-201ENST00000358694 KIAA0141Q14154 515 aaPredicted RBP8.15□□□□□ -1.11
CTNND1-201ENST00000358694 LRRC10Q5BKY1 277 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 ZNF628Q5EBL2 1059 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 DPY19L2P2Q6ZN68 376 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 DOK3Q7L591 496 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 KIAA1958Q8N8K9 716 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 OR2A1Q8NGT9 310 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 ACY3Q96HD9 319 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 SLC22A12Q96S37 553 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 POFUT1Q9H488 388 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 SLC17A4Q9Y2C5 497 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 HCFC2Q9Y5Z7 792 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 TRBV4-1A0A0J9YWV2 114 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 NDUFB3O43676 98 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 PNPP00491 289 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 PENKP01210 267 aaPredicted RBP8.15□□□□□ -1.11
CTNND1-201ENST00000358694 ZNF865P0CJ78 1059 aaPredicted RBP8.15□□□□□ -1.11
CTNND1-201ENST00000358694 ITGAMP11215 1152 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 OXA1LQ15070 435 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 STUMQ69YW2 141 aa8.15□□□□□ -1.11
CTNND1-201ENST00000358694 LCN15Q6UWW0 184 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms