RNA–Protein interactions for RNA: ENST00000357246.3

MAP1LC3C-201, Transcript of microtubule associated protein 1 light chain 3 gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3C, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3C-201ENST00000357246 FBXO17Q96EF6 278 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 FAM46AQ96IP4 442 aaKnown RBP7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 Q96M85 177 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 GPX7Q96SL4 187 aaPredicted RBP7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SMR3AQ99954 134 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 RHNO1Q9BSD3 238 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 WACQ9BTA9 647 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 REG4Q9BYZ8 158 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 NDEL1Q9GZM8 345 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 C1orf198Q9H425 327 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 RNF121Q9H920 327 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 NRIP3Q9NQ35 241 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 PRPF19Q9UMS4 504 aaKnown RBP7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 AURKCQ9UQB9 309 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 CMAHPQ9Y471 501 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 UGT2A1Q9Y4X1 527 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SNX5Q9Y5X3 404 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 VPS13CQ709C8 3753 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 HIVEP2P31629 2446 aa7.32□□□□□ -1.24
MAP1LC3C-201ENST00000357246 IQCMA0A1B0GVH7 501 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 TCRBV5S2A0A599 114 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 A6NHS1 94 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 UNC119BA6NIH7 251 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 XKRYO14609 159 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 IMPA2O14732 288 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 ACOT8O14734 319 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 ARPC3O15145 178 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SSX4O60224 188 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SLC2A10O95528 541 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SNAP29O95721 258 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 LY6G6DO95868 133 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 TXNDC12O95881 172 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 CST2P09228 141 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 PCSK6P29122 969 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SDHAP31040 664 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 RRM2P31350 389 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 CDAP32320 146 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 IFNGR2P38484 337 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 MAGEA2P43356 314 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 GSSP48637 474 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 NUDT6P53370 316 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 FXYD6P3P58550 94 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SNRPD2P62316 118 aaKnown RBP7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SPIBQ01892 262 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 PLP2Q04941 152 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 FMODQ06828 376 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 TRAP1Q12931 704 aaKnown RBP7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 TOP3AQ13472 1001 aaPredicted RBP7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SGCAQ16586 387 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 RFX4Q33E94 735 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 C11orf91Q3C1V1 193 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 LCN8Q6JVE9 175 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 KRT80Q6KB66 452 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 VHLLQ6RSH7 139 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SMARCD3Q6STE5 483 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 CLEC9AQ6UXN8 241 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 CYP2R1Q6VVX0 501 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SYT9Q86SS6 491 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 LRRC18Q8N456 261 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 LINC00471Q8N535 108 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 CLDN22Q8N7P3 220 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SLC30A7Q8NEW0 376 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 NSMAFQ92636 917 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 ASB9Q96DX5 294 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 GPA33Q99795 319 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 TRIM15Q9C019 465 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 LRMDAQ9H2I8 198 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 MAGIXQ9H6Y5 334 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SLC7A8Q9UHI5 535 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 ADAM18Q9Y3Q7 739 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 V9GYQ6 96 aa7.31□□□□□ -1.24
MAP1LC3C-201ENST00000357246 PRSS37A4D1T9 235 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 RNF223E7ERA6 249 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 IDH3BO43837 385 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 OR10H3O60404 316 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 HEXAP06865 529 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 CSF3P09919 207 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 ATP6V1B2P21281 511 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 FPR3P25089 353 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 PPOXP50336 477 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 RPS6KA3P51812 740 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 UCP2P55851 309 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 PSMA6P60900 246 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 PCBD1P61457 104 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 RPS23P62266 143 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 PSG4Q00888 419 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 GALK2Q01415 458 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 TSPAN31Q12999 210 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 SNTB2Q13425 540 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 MSMPQ1L6U9 139 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 MESTQ5EB52 335 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 PABPC1L2AQ5JQF8 200 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 PGM2L1Q6PCE3 622 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 CLEC2AQ6UVW9 174 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 THSD4Q6ZMP0 1018 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 C1orf174Q8IYL3 243 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 ALDH16A1Q8IZ83 802 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 CPEB3Q8NE35 698 aaKnown RBP7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 GNPDA2Q8TDQ7 276 aa7.3□□□□□ -1.24
MAP1LC3C-201ENST00000357246 NEU4Q8WWR8 484 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms