RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 TMEM184AQ6ZMB5 413 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 SLC30A7Q8NEW0 376 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 OR52N1Q8NH53 320 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 PRRG4Q9BZD6 226 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 TSPAN10Q9H1Z9 355 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-202ENST00000355815 APC2O95996 2303 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 IGKV1-8A0A0C4DH67 115 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 NSA2O95478 260 aaKnown RBP12.85□□□□□ -0.35
SREBF1-202ENST00000355815 LIMS3P0CW19 117 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 LIMS4P0CW20 117 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 NID1P14543 1247 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 RABIFP47224 123 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 GLYATL3Q5SZD4 288 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 RNF165Q6ZSG1 346 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 RASGRP3Q8IV61 690 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 SGPP2Q8IWX5 399 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 OR51T1Q8NGJ9 327 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF587Q96SQ5 575 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-202ENST00000355815 NPFFR2Q9Y5X5 522 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 PRAMEF26H0Y7S4 382 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 SBK2P0C263 348 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 SERPINF1P36955 418 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 RSU1Q15404 277 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF79Q15937 498 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 RNF151Q2KHN1 245 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 SLC22A25Q6T423 547 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 THSD4Q6ZMP0 1018 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 COX14Q96I36 57 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 EHFQ9NZC4 300 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 FAM96BQ9Y3D0 163 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 ATRXP46100 2492 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 OR5K4A6NMS3 321 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 PYCARD-AS1I3L0S3 204 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 SCAF4O95104 1147 aaKnown RBP12.84□□□□□ -0.35
SREBF1-202ENST00000355815 CD3DP04234 171 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 CHATP28329 748 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 TCEAL6Q6IPX3 200 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 OR51Q1Q8NH59 317 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 HIST1H2AAQ96QV6 131 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 ADAT1Q9BUB4 502 aaKnown RBP12.84□□□□□ -0.35
SREBF1-202ENST00000355815 RSRP1Q9BUV0 290 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 ALG12Q9BV10 488 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 DLL4Q9NR61 685 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 LUZP4Q9P127 313 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 FBXO4Q9UKT5 387 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF346Q9UL40 294 aaKnown RBP12.84□□□□□ -0.35
SREBF1-202ENST00000355815 TRAPPC4Q9Y296 219 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 MN1Q10571 1320 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-202ENST00000355815 HIST1H1CP16403 213 aaKnown RBP12.84□□□□□ -0.35
SREBF1-202ENST00000355815 PLA2G7Q13093 441 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF704Q6ZNC4 412 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-202ENST00000355815 Q6ZTK2 550 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 MED25Q71SY5 747 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 GKN2Q86XP6 184 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 SUMF1Q8NBK3 374 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 PGAM5Q96HS1 289 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 CRLF2Q9HC73 371 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 PLEKHB1Q9UF11 243 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-202ENST00000355815 PRODH2Q9UF12 536 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 CBLCQ9ULV8 474 aa12.84□□□□□ -0.35
SREBF1-202ENST00000355815 TMEM235A6NFC5 223 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 BHLHE40O14503 412 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 PMP2P02689 132 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 PIPP12273 146 aaPredicted RBP12.83□□□□□ -0.36
SREBF1-202ENST00000355815 SNRPNP63162 240 aaKnown RBP12.83□□□□□ -0.36
SREBF1-202ENST00000355815 ZAR1Q86SH2 424 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 CDH26Q8IXH8 852 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 ZNF687Q8N1G0 1237 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 ZNF709Q8N972 641 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 BPIFCQ8NFQ6 507 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 THRSPQ92748 146 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 YIPF5Q969M3 257 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 FBXO17Q96EF6 278 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 LHX9Q9NQ69 397 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 ZFP57Q9NU63 452 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 ALKBH4Q9NXW9 302 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 MMP24Q9Y5R2 645 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 MYLKQ15746 1914 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 SLC22A23A1A5C7 686 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 C4orf51C9J302 202 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 GABARAPH6UMI1 98 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 ZNF354AO60765 605 aaPredicted RBP12.83□□□□□ -0.36
SREBF1-202ENST00000355815 NXPH3O95157 252 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 LPLP06858 475 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 SERPINA2P20848 420 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 ZP3P21754 424 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 TAGLN2P37802 199 aaKnown RBP12.83□□□□□ -0.36
SREBF1-202ENST00000355815 SELENOPP49908 381 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 EMDP50402 254 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 MRPS34P82930 218 aaKnown RBP12.83□□□□□ -0.36
SREBF1-202ENST00000355815 GUCA2AQ02747 115 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 FABP9Q0Z7S8 132 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 KIAA1958Q8N8K9 716 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 OR4C3Q8NH37 302 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 WDR34Q96EX3 536 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 SGCZQ96LD1 299 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 USB1Q9BQ65 265 aaKnown RBP12.83□□□□□ -0.36
SREBF1-202ENST00000355815 NUDT22Q9BRQ3 303 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 ARHGAP9Q9BRR9 750 aa12.83□□□□□ -0.36
SREBF1-202ENST00000355815 MARVELD1Q9BSK0 173 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms