RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 PROKR2Q8NFJ6 384 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 OR13C2Q8NGS9 318 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 OR4Q3Q8NH05 313 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 PFN4Q8NHR9 129 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 MFSD8Q8NHS3 518 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 FAM222BQ8WU58 562 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 ASB15Q8WXK1 588 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 DDIT4LQ96D03 193 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 TMEM80Q96HE8 168 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 COG8Q96MW5 612 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF582Q96NG8 517 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 MNTQ99583 582 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 MND1Q9BWT6 205 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 ANGPTL4Q9BY76 406 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 EGLN3Q9H6Z9 239 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 METTL7AQ9H8H3 244 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 SMURF1Q9HCE7 757 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 NANSQ9NR45 359 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 TVP23BQ9NYZ1 205 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 KLRF1Q9NZS2 232 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 CHRNA9Q9UGM1 479 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 OSGIN1Q9UJX0 560 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 ERGIC3Q9Y282 383 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 KLF13Q9Y2Y9 288 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 EXOSC1Q9Y3B2 195 aaKnown RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 MRPS18CQ9Y3D5 142 aaKnown RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 FAM215AQ9Y5M1 114 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 CEPT1Q9Y6K0 416 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 A0A0G2JNJ9 132 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 A0A1W2PNV4 684 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 GJE1A6NN92 205 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 PTGES3LE9PB15 166 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 WWP2O00308 870 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 ARHGEF9O43307 516 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 SCO2O43819 266 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 ENTPD6O75354 484 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 TRIM3O75382 744 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-201ENST00000355766 CRLF1O75462 422 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 GABARAPO95166 117 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 AHSA1O95433 338 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 MT-ND2P03891 347 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 HIST1H2ABP04908 130 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 CD14P08571 375 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 HK1P19367 917 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 FUT1P19526 365 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 GALP22466 123 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 SDHAP31040 664 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 PTGDSP41222 190 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 SOX3P41225 446 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 CDH11P55287 796 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 EGR4Q05215 589 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 ACSM1Q08AH1 577 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 SELENBP1Q13228 472 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 PMS2P3Q13401 168 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 DAZAP2Q15038 168 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-201ENST00000355766 NEDD8Q15843 81 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 SMN1Q16637 294 aaKnown RBP6.17□□□□□ -1.42
VPS13A-201ENST00000355766 PLPPR5Q32ZL2 321 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 NDUFAF6Q330K2 333 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 C1orf140Q5VVS0 124 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 SLC22A10Q63ZE4 541 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 ACSM5Q6NUN0 579 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 NIPAL3Q6P499 406 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 B3GNT6Q6ZMB0 384 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 GDPGP1Q6ZNW5 385 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 HIST3H2AQ7L7L0 130 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 NANOGNBQ7Z5D8 188 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 CXorf67Q86X51 503 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-201ENST00000355766 ANKRD13BQ86YJ7 626 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 LIX1LQ8IVB5 337 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 GTPBP8Q8N3Z3 284 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-201ENST00000355766 ZFP62Q8NB50 900 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-201ENST00000355766 OR10G3Q8NGC4 313 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 OR52N1Q8NH53 320 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 GGHQ92820 318 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 HIST1H2ACQ93077 130 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 ISOC1Q96CN7 298 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 C1GALT1C1Q96EU7 318 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 MRPL48Q96GC5 212 aaKnown RBP6.17□□□□□ -1.42
VPS13A-201ENST00000355766 SAMD8Q96LT4 415 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 COQ7Q99807 217 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 TTYH2Q9BSA4 534 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 IFT27Q9BW83 186 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 RTN4RQ9BZR6 473 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 DSN1Q9H410 356 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 PLEKHF2Q9H8W4 249 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 SIAEQ9HAT2 523 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 SERINC1Q9NRX5 453 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 HPF1Q9NWY4 346 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 CHCHD3Q9NX63 227 aaKnown RBP6.17□□□□□ -1.42
VPS13A-201ENST00000355766 ALKBH4Q9NXW9 302 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 MRPL39Q9NYK5 338 aaKnown RBP6.17□□□□□ -1.42
VPS13A-201ENST00000355766 Q9UFV3 132 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 ENPP5Q9UJA9 477 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 MOKQ9UQ07 419 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 B3GALT5Q9Y2C3 310 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 EXOGQ9Y2C4 368 aaKnown RBP6.17□□□□□ -1.42
VPS13A-201ENST00000355766 HDGFL3Q9Y3E1 203 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 AKAP6Q13023 2319 aa6.17□□□□□ -1.42
VPS13A-201ENST00000355766 HIVEP2P31629 2446 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms