RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 MYO7AQ13402 2215 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 RGS13O14921 159 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 UTS2O95399 124 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 NTN1O95631 604 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 OPN1LWP04000 364 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 EPXP11678 715 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 RFX2P48378 723 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 CARD18P57730 90 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 RHEBQ15382 184 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 SLC9A3R2Q15599 337 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 LIPNQ5VXI9 398 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 SSX6Q7RTT6 188 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 SLC41A2Q96JW4 573 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 NXF2Q9GZY0 626 aaKnown RBP11.24□□□□□ -0.61
COLCA1-201ENST00000355430 AIPO00170 330 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 LCATP04180 440 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 CALCBP10092 127 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 M6PRP20645 277 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 SEC61A1P61619 476 aaKnown RBP11.24□□□□□ -0.61
COLCA1-201ENST00000355430 GNMTQ14749 295 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 FRMD1Q8N878 549 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 MRGPRX3Q96LB0 322 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 ANKRD10Q9NXR5 420 aa11.24□□□□□ -0.61
COLCA1-201ENST00000355430 LOC100289279A0A1B0GTE1 492 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 AGAP14A8MT82 685 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 SUSD5O60279 629 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 HTR3BO95264 441 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 GAAP10253 952 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 ST6GAL1P15907 406 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 COL9A1P20849 921 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 ENPP1P22413 925 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 AANATQ16613 207 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 CLVS2Q5SYC1 327 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 OR5D14Q8NGL3 314 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 ABHD5Q8WTS1 349 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 TSPAN10Q9H1Z9 355 aaPredicted RBP11.23□□□□□ -0.61
COLCA1-201ENST00000355430 HRH4Q9H3N8 390 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 TSPAN11A1L157 253 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 OR6C76A6NM76 312 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 EIF1BO60739 113 aaKnown RBP11.23□□□□□ -0.61
COLCA1-201ENST00000355430 DIO1P49895 249 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 LUMP51884 338 aaPredicted RBP11.23□□□□□ -0.61
COLCA1-201ENST00000355430 POLR2HP52434 150 aaKnown RBP11.23□□□□□ -0.61
COLCA1-201ENST00000355430 SLC51BQ86UW2 128 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 A0A0B4J2A0 478 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 IFITM5A6NNB3 132 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 ANKRD30BLA7E2S9 258 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 NPIPB8E9PQR5 432 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 IGHG1P01857 330 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 SEMG1P04279 462 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 RUNX2Q13950 521 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 CD300LDQ6UXZ3 194 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 ULBP2Q9BZM5 246 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 SEMA4CQ9C0C4 833 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 LRFN1Q9P244 771 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 SHPKQ9UHJ6 478 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 EXOGQ9Y2C4 368 aaKnown RBP11.23□□□□□ -0.61
COLCA1-201ENST00000355430 FAM166BA8MTA8 275 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 TBX19O60806 448 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 GFERP55789 205 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 DYRK1AQ13627 763 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 BCL2A1Q16548 175 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 GLYATL3Q5SZD4 288 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 AAED1Q7RTV5 226 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 NUDT22Q9BRQ3 303 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 PRDM7Q9NQW5 492 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 SLC22A7Q9Y694 548 aa11.23□□□□□ -0.61
COLCA1-201ENST00000355430 LPLP06858 475 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 HOXC4P09017 264 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-201ENST00000355430 MMP15P51511 669 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 POU3F1Q03052 451 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-201ENST00000355430 FZD2Q14332 565 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 GFRALQ6UXV0 394 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 SYS1Q8N2H4 156 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 EXD3Q8N9H8 876 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 MAFIPQ8WZ33 124 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 SMIM3Q9BZL3 60 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 CGGBP1Q9UFW8 167 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-201ENST00000355430 POMT2Q9UKY4 750 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 RHBDD3Q9Y3P4 386 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 B3GALT1Q9Y5Z6 326 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 K7EQS6 105 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 CCSO14618 274 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 RAD51DO75771 328 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 TMEM225BP0DP42 221 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 APEHP13798 732 aaKnown RBP11.22□□□□□ -0.61
COLCA1-201ENST00000355430 GNRHRP30968 328 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 SNU13P55769 128 aaKnown RBP11.22□□□□□ -0.61
COLCA1-201ENST00000355430 SLC10A1Q14973 349 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 CLPPQ16740 277 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-201ENST00000355430 C1QTNF12Q5T7M4 302 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 MORN4Q8NDC4 146 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 TOMM40LQ969M1 308 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 TSSK2Q96PF2 358 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 DHRS9Q9BPW9 319 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 CLEC1BQ9P126 229 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 KLK11Q9UBX7 282 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 TRAV17A0A0B4J275 112 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 TSPAN15O95858 294 aa11.22□□□□□ -0.61
COLCA1-201ENST00000355430 DCTDP32321 178 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms