RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 TGM7Q96PF1 710 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 SELENOIQ9C0D9 397 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 RMND5AQ9H871 391 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 OPN4Q9UHM6 478 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 MRTO4Q9UKD2 239 aaKnown RBP4.95□□□□□ -1.62
CD47-201ENST00000355354 LOC390937A0A1W2PQ73 354 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 FAM157AC9JC47 383 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 ARHGEF9O43307 516 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 FOLR1P15328 257 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 ARRB1P49407 418 aaPredicted RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 TAGLNQ01995 201 aaKnown RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 FBLN7Q53RD9 439 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 C1orf229Q6ZS94 237 aaPredicted RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 CCDC80Q76M96 950 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 C9orf40Q8IXQ3 194 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 TRMT10AQ8TBZ6 339 aaKnown RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 ADAMTS17Q8TE56 1095 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 ZSCAN5AQ9BUG6 496 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 CACNG6Q9BXT2 260 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 MCRIP1C9JLW8 97 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 SUSD5O60279 629 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 ONECUT2O95948 504 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 ADH1BP00325 375 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 IGHV3-13P01766 116 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 IGHV3-7P01780 117 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 RFPL3SP0C7P2 107 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 GPR3P46089 330 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 CSTF3Q12996 717 aaKnown RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 CLEC12BQ2HXU8 276 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 ELP2Q6IA86 826 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 AMZ2Q86W34 360 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 SDR16C5Q8N3Y7 309 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 SCAIQ8N9R8 606 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 LRRC75AQ8NAA5 344 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 ZSCAN4Q8NAM6 433 aaPredicted RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 OR1S2Q8NGQ3 325 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 OR6S1Q8NH40 331 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 PTPMT1Q8WUK0 201 aaPredicted RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 MIEF1Q9NQG6 463 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 NFKBIL1Q9UBC1 381 aaPredicted RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 AMDHD2Q9Y303 409 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 IGKV1-12A0A0C4DH73 117 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 EDDM13A0A1B0GTR0 161 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 RAB27BO00194 218 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 RER1O15258 196 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 IGKV1D-12P01611 117 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 CELA3AP09093 270 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 ATP12AP54707 1039 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 TGM3Q08188 693 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 ZNF846Q147U1 533 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 BAIAP2L2Q6UXY1 529 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 CDH24Q86UP0 819 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 OR52R1Q8NGF1 315 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 OR1J2Q8NGS2 313 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 ZNF563Q8TA94 476 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 NSMAFQ92636 917 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 ERGIC1Q969X5 290 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 SNRNP40Q96DI7 357 aaKnown RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 ITPKCQ96DU7 683 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 GNRHR2Q96P88 292 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 LRRC61Q9BV99 259 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 TEX101Q9BY14 249 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 SHARPINQ9H0F6 387 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 EVA1AQ9H8M9 152 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 EFCAB10A6NFE3 127 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 IDH3BO43837 385 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 FGF9P31371 208 aaPredicted RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 RPA4Q13156 261 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 ENPP7Q6UWV6 458 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 HDDC3Q8N4P3 179 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 OR8H1Q8NGG4 311 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 GTF3AQ92664 365 aaKnown RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 MIB2Q96AX9 1013 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 RGMAQ96B86 450 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 TM4SF19Q96DZ7 209 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 POLDIP3Q9BY77 421 aaKnown RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 CPNE5Q9HCH3 593 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 TBCCD1Q9NVR7 557 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 B3GAT1Q9P2W7 334 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 EPHA6Q9UF33 1036 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 SUSD2Q9UGT4 822 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 IL36AQ9UHA7 158 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 DIMT1Q9UNQ2 313 aaKnown RBP4.94□□□□□ -1.62
CD47-201ENST00000355354 VDAC3Q9Y277 283 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 WDR45Q9Y484 360 aa4.94□□□□□ -1.62
CD47-201ENST00000355354 RNF13O43567 381 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 SIGLEC6O43699 453 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 ZIC3O60481 467 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 KCNJ13O60928 360 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 PDGFAP04085 211 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 ANXA2P07355 339 aaKnown RBP4.93□□□□□ -1.62
CD47-201ENST00000355354 HSD11B2P80365 405 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 EIF2B1Q14232 305 aaKnown RBP4.93□□□□□ -1.62
CD47-201ENST00000355354 PGGHGQ32M88 737 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 AMZ1Q400G9 498 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 FAM166AQ6J272 317 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 SLC27A4Q6P1M0 643 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 LINC00114Q6XXX2 140 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 YAF2Q8IY57 180 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 GPBAR1Q8TDU6 330 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms