RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 CA14Q9ULX7 337 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 EMC9Q9Y3B6 208 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 ASCC3Q8N3C0 2202 aaKnown RBP17.61■□□□□ 0.41
COL13A1-201ENST00000354547 A0A1W2PPL8 197 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 UBE2QL1A1L167 161 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 ZNF35P13682 527 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 FBLP22087 321 aaKnown RBP17.61■□□□□ 0.41
COL13A1-201ENST00000354547 PRSS3P35030 304 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 RBMS2Q15434 407 aaKnown RBP17.61■□□□□ 0.41
COL13A1-201ENST00000354547 SMAD2Q15796 467 aaKnown RBP17.61■□□□□ 0.41
COL13A1-201ENST00000354547 SLC29A4Q7RTT9 530 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 JAGN1Q8N5M9 183 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 EXO5Q9H790 373 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 EMC3Q9P0I2 261 aa17.61■□□□□ 0.41
COL13A1-201ENST00000354547 M0QYG6 137 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 EIF1AXP47813 144 aaKnown RBP17.6■□□□□ 0.41
COL13A1-201ENST00000354547 H2BFSP57053 126 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 CORO6Q6QEF8 472 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 ALKAL2Q6UX46 152 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 TMED4Q7Z7H5 227 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 MUC20Q8N307 709 aaPredicted RBP17.6■□□□□ 0.41
COL13A1-201ENST00000354547 OR1J4Q8NGS1 313 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 ZNF304Q9HCX3 659 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 ZNF275Q9NSD4 429 aaPredicted RBP17.6■□□□□ 0.41
COL13A1-201ENST00000354547 TMEM272A0A1B0GTI8 110 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 C10orf142B7Z368 130 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 LMX1BO60663 402 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 LDOC1O95751 146 aaPredicted RBP17.6■□□□□ 0.41
COL13A1-201ENST00000354547 DCAF12L2Q5VW00 463 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 SLC38A6Q8IZM9 456 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 CMKLR1Q99788 373 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 CENPMQ9NSP4 180 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 CTSFQ9UBX1 484 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 VDAC3Q9Y277 283 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 MMACHCQ9Y4U1 282 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 LRP12Q9Y561 859 aa17.6■□□□□ 0.41
COL13A1-201ENST00000354547 IGKV3D-11A0A0A0MRZ8 115 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 IGLV3-19P01714 112 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 OPN1LWP04000 364 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 CSRP1P21291 193 aaKnown RBP17.59■□□□□ 0.41
COL13A1-201ENST00000354547 MNDAP41218 407 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 SGCBQ16585 318 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 DAZLQ92904 295 aaKnown RBP17.59■□□□□ 0.41
COL13A1-201ENST00000354547 SLC25A44Q96H78 314 aaPredicted RBP17.59■□□□□ 0.41
COL13A1-201ENST00000354547 GSX2Q9BZM3 304 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 VN1R1Q9GZP7 353 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 PLSCR5A0PG75 271 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 FITM1A5D6W6 292 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 SHISA8B8ZZ34 492 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 TSPAN2O60636 221 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 GIPP09681 153 aaPredicted RBP17.59■□□□□ 0.41
COL13A1-201ENST00000354547 IGFBP4P22692 258 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 GALNSP34059 522 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 RIDAP52758 137 aaKnown RBP17.59■□□□□ 0.41
COL13A1-201ENST00000354547 CLLU1Q5K131 121 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 B3GNTL1Q67FW5 361 aaPredicted RBP17.59■□□□□ 0.41
COL13A1-201ENST00000354547 TMEM225Q6GV28 225 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 C3P1Q6ZMU1 363 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 SPICQ8N5J4 248 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 COQ8AQ8NI60 647 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 FARSAQ9Y285 508 aaKnown RBP17.59■□□□□ 0.41
COL13A1-201ENST00000354547 RTTNQ86VV8 2226 aa17.59■□□□□ 0.41
COL13A1-201ENST00000354547 LOC100509620A0A075B734 347 aa17.58■□□□□ 0.41
COL13A1-201ENST00000354547 SLC22A23A1A5C7 686 aa17.58■□□□□ 0.41
COL13A1-201ENST00000354547 ALG1L2C9J202 215 aa17.58■□□□□ 0.41
COL13A1-201ENST00000354547 IGF2P01344 180 aa17.58■□□□□ 0.41
COL13A1-201ENST00000354547 LIPCP11150 499 aa17.58■□□□□ 0.41
COL13A1-201ENST00000354547 HSD11B2P80365 405 aa17.58■□□□□ 0.41
COL13A1-201ENST00000354547 AANATQ16613 207 aa17.58■□□□□ 0.41
COL13A1-201ENST00000354547 C15orf40Q8WUR7 153 aa17.58■□□□□ 0.41
COL13A1-201ENST00000354547 DUSP15Q9H1R2 295 aaPredicted RBP17.58■□□□□ 0.41
COL13A1-201ENST00000354547 SLC2A4RGQ9NR83 387 aa17.58■□□□□ 0.41
COL13A1-201ENST00000354547 TCRBV16S1A1N1A0A5B0 115 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 AHSA1O95433 338 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 ARRB1P49407 418 aaPredicted RBP17.58■□□□□ 0.4
COL13A1-201ENST00000354547 POLR2HP52434 150 aaKnown RBP17.58■□□□□ 0.4
COL13A1-201ENST00000354547 RAP2BP61225 183 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 CFHR1Q03591 330 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 C14orf28Q4W4Y0 310 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 RNF128Q8TEB7 428 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 ASB5Q8WWX0 329 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 ARL5BQ96KC2 179 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 TXNIPQ9H3M7 391 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 CKLFQ9UBR5 152 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 LOC100289279A0A1B0GTE1 492 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 LOC101059948A0A1B0GTJ6 334 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 CSF1P09603 554 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 AKAIN1P0CW23 69 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 CPN1P15169 458 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 CD27P26842 260 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 B3GNT4Q9C0J1 378 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 ARL6Q9H0F7 186 aa17.58■□□□□ 0.4
COL13A1-201ENST00000354547 MRPS18BQ9Y676 258 aaKnown RBP17.58■□□□□ 0.4
COL13A1-201ENST00000354547 IGLV1-36A0A0B4J1U3 117 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 SLC17A2O00624 439 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 PHYHO14832 338 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 DNASE1L1P49184 302 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 STEAP1BQ6NZ63 245 aa17.57■□□□□ 0.4
COL13A1-201ENST00000354547 KCTD18Q6PI47 426 aaPredicted RBP17.57■□□□□ 0.4
COL13A1-201ENST00000354547 SYT13Q7L8C5 426 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms