RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 RRM2BQ7LG56 351 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 BPIFB2Q8N4F0 458 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 CLDND2Q8NHS1 167 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 ZNF563Q8TA94 476 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 TMEM234Q8WY98 164 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 ST8SIA1Q92185 356 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 FAM120BQ96EK7 910 aaKnown RBP9.68□□□□□ -0.86
RTN3-204ENST00000354497 STACQ99469 402 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 KATNB1Q9BVA0 655 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 SLIRPQ9GZT3 109 aaKnown RBP9.68□□□□□ -0.86
RTN3-204ENST00000354497 REEP4Q9H6H4 257 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 CTPS2Q9NRF8 586 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 DUSP22Q9NRW4 184 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 PARPBPQ9NWS1 579 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 SLC9A8Q9Y2E8 581 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 TRRAPQ9Y4A5 3859 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 SERTM1A2A2V5 107 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 PMS2P2O95744 297 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 IL6P05231 212 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 SAGP10523 405 aaPredicted RBP9.67□□□□□ -0.86
RTN3-204ENST00000354497 NPR2P20594 1047 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 CALCRP30988 508 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 THBS4P35443 961 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 ARHGDIAP52565 204 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 BPIFB3P59826 476 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 MS4A2Q01362 244 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 NAAAQ02083 359 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 MVKQ03426 396 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 FOXL1Q12952 345 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 GPR68Q15743 365 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 GRK1Q15835 563 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 KDM4DQ6B0I6 523 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 LSRQ86X29 649 aaPredicted RBP9.67□□□□□ -0.86
RTN3-204ENST00000354497 CDK20Q8IZL9 346 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 RNF113BQ8IZP6 322 aaKnown RBP9.67□□□□□ -0.86
RTN3-204ENST00000354497 DEDD2Q8WXF8 326 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 ZNF566Q969W8 418 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 TSSK3Q96PN8 268 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 C12orf57Q99622 126 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 OR11A1Q9GZK7 315 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 MUC13Q9H3R2 512 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 NCOR1P1Q9H4R4 102 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 SEC61A2Q9H9S3 476 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 ACER3Q9NUN7 267 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 TREM2Q9NZC2 230 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 PPIAL4AQ9Y536 164 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 FLVCR1Q9Y5Y0 555 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 KCNE3Q9Y6H6 103 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 ARFGEF3Q5TH69 2177 aa9.67□□□□□ -0.86
RTN3-204ENST00000354497 CLDN24A6NM45 220 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 KRBOX1C9JBD0 128 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 PSMD9O00233 223 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 ETV2O00321 342 aaPredicted RBP9.66□□□□□ -0.86
RTN3-204ENST00000354497 APOL3O95236 402 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 LGI1O95970 557 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 PNPP00491 289 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 CSTAP01040 98 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 SERPINE1P05121 402 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 CECR9P0C854 216 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 RRASP10301 218 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 SELLP14151 372 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 ATP5F1P24539 256 aaPredicted RBP9.66□□□□□ -0.86
RTN3-204ENST00000354497 RYKP34925 604 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 MEOX2P50222 304 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 SERPINB9P50453 376 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 SLC16A1P53985 500 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 RAB4BP61018 213 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 ZNF91Q05481 1191 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 SKP2Q13309 424 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 CHI3L2Q15782 390 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 ZNF311Q5JNZ3 666 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 ANKRD16Q6P6B7 361 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 TMEM151AQ8N4L1 468 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 EIF4E3Q8N5X7 224 aaKnown RBP9.66□□□□□ -0.86
RTN3-204ENST00000354497 TEX29Q8N6K0 151 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 LRRC17Q8N6Y2 441 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 HIPK4Q8NE63 616 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 OR4M2Q8NGB6 313 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 OR4F15Q8NGB8 312 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 AURKBQ96GD4 344 aaPredicted RBP9.66□□□□□ -0.86
RTN3-204ENST00000354497 CENPNQ96H22 339 aaPredicted RBP9.66□□□□□ -0.86
RTN3-204ENST00000354497 NAA11Q9BSU3 229 aaPredicted RBP9.66□□□□□ -0.86
RTN3-204ENST00000354497 ACTRT3Q9BYD9 372 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 LAT2Q9GZY6 243 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 ZNF385DQ9H6B1 395 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 ACSS1Q9NUB1 689 aaPredicted RBP9.66□□□□□ -0.86
RTN3-204ENST00000354497 TMEM45AQ9NWC5 275 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 SMPD3Q9NY59 655 aaPredicted RBP9.66□□□□□ -0.86
RTN3-204ENST00000354497 CHRNA9Q9UGM1 479 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 COPS3Q9UNS2 423 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 CBY1Q9Y3M2 126 aa9.66□□□□□ -0.86
RTN3-204ENST00000354497 A0A096LPE4 126 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 A0A1W2PPZ6 126 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 NR5A2O00482 541 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 TSPAN4O14817 238 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 TFP02787 698 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 CDK1P06493 297 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 SMIM6P0DI80 62 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 GAAP10253 952 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 CRHBPP24387 322 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms