RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 KIR3DP1A8MWS1 328 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.17□□□□□ -1.42
TRIM55-203ENST00000350034 GPR171O14626 319 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 PDCD5O14737 125 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 DNPH1O43598 174 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 RAD1O60671 282 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 RAMP1O60894 148 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 PFDN1O60925 122 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 LRP3O75074 770 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 RPP14O95059 124 aaKnown RBP6.17□□□□□ -1.42
TRIM55-203ENST00000350034 MPZL1O95297 269 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 WNT11O96014 354 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 PNPP00491 289 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 RAF1P04049 648 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 SPARCP09486 303 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 PGA4P0DJD7 388 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 PGA3P0DJD8 388 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 CD37P11049 281 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 SLC2A2P11168 524 aaPredicted RBP6.17□□□□□ -1.42
TRIM55-203ENST00000350034 EPXP11678 715 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 ATF1P18846 271 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 ELK1P19419 428 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 SRMP19623 302 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 KLK2P20151 261 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 CFPP27918 469 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 DLSTP36957 453 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 RPS27P42677 84 aaKnown RBP6.17□□□□□ -1.42
TRIM55-203ENST00000350034 RFX2P48378 723 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 AGFG1P52594 562 aaKnown RBP6.17□□□□□ -1.42
TRIM55-203ENST00000350034 ZNF133P52736 654 aaPredicted RBP6.17□□□□□ -1.42
TRIM55-203ENST00000350034 BIDP55957 195 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 GPR85P60893 370 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 RAC1P63000 192 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 ADAM8P78325 824 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 FMODQ06828 376 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 RASGEF1BQ0VAM2 473 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 ASAH1Q13510 395 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 POU4F3Q15319 338 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 KCNMB1Q16558 191 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 WDR38Q5JTN6 314 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 THEM4Q5T1C6 240 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 DEGS2Q6QHC5 323 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 LRRC69Q6ZNQ3 347 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 ASB18Q6ZVZ8 466 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 HDDC2Q7Z4H3 204 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 ZNF554Q86TJ5 538 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 LRRTM1Q86UE6 522 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 LRRC28Q86X40 367 aaPredicted RBP6.17□□□□□ -1.42
TRIM55-203ENST00000350034 RAB43Q86YS6 212 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 BEST3Q8N1M1 668 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 PRSS35Q8N3Z0 413 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 NOXO1Q8NFA2 376 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 IL17RDQ8NFM7 739 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 OR52N5Q8NH56 324 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 OR5AK2Q8NH90 309 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 CHAC2Q8WUX2 184 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 SLC39A7Q92504 469 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 NSMAFQ92636 917 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 THRSPQ92748 146 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 MCHR2Q969V1 340 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 RELTQ969Z4 430 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 SLC25A44Q96H78 314 aaPredicted RBP6.17□□□□□ -1.42
TRIM55-203ENST00000350034 GNRHR2Q96P88 292 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 RBP7Q96R05 134 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 NEURL2Q9BR09 285 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 OR2B2Q9GZK3 357 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 TMEM185BQ9H7F4 350 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 B3GAT2Q9NPZ5 323 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 TIGARQ9NQ88 270 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 ETAA1Q9NY74 926 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 IKZF2Q9UKS7 526 aa6.17□□□□□ -1.42
TRIM55-203ENST00000350034 MPDZO75970 2070 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 ITPR3Q14573 2671 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 A0A0J9YW62 118 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 A0A1W2PPK0 400 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 ACOD1A6NK06 481 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 IFITM5A6NNB3 132 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 TTLL8A6PVC2 850 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 G3V3Y1 287 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 SULT2B1O00204 365 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 CDK2AP1O14519 115 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 PLA2G10O15496 165 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 EIF1BO60739 113 aaKnown RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 TMCC2O75069 709 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 TNFSF15O95150 251 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 PAHP00439 452 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 IGHG1P01857 330 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 HLA-DQA2P01906 255 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 APOA1P02647 267 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 OPN1LWP04000 364 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 P04436 131 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 EIF4EP06730 217 aaKnown RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 ZNF823P16415 610 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 CSRP1P21291 193 aaKnown RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 CNR1P21554 472 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 AZGP1P25311 298 aaKnown RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 MAPK3P27361 379 aaPredicted RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 LAP3P28838 519 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 DCTDP32321 178 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 SFTPDP35247 375 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms