RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ZFAND5O76080 213 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 TCRBP04435 133 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 RFC3P40938 356 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 RPS11P62280 158 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 OVCH1Q7RTY7 1134 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 UBL7Q96S82 380 aaPredicted RBP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 SPSB2Q99619 263 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 ADAM19Q9H013 955 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 COMMD4Q9H0A8 199 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 ZNF160Q9HCG1 818 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 MYOTQ9UBF9 498 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 FBXO9Q9UK97 447 aaPredicted RBP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 ZNF407Q9C0G0 2248 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 SEC14L5O43304 696 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 KHDRBS3O75525 346 aaKnown RBP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 GNALP38405 381 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 PUDPQ08623 228 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 ALKBH1Q13686 389 aaKnown RBP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 RAET1LQ5VY80 246 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 OR10K2Q6IF99 312 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 SIAH3Q8IW03 269 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 CMTM4Q8IZR5 234 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 FAM181AQ8N9Y4 354 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 GIMAP1Q8WWP7 306 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 TMEM234Q8WY98 164 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 MRPL48Q96GC5 212 aaKnown RBP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 PTDSS2Q9BVG9 487 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 SLC19A3Q9BZV2 496 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 SLITRK2Q9H156 845 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 EMC7Q9NPA0 242 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 RABL2AQ9UBK7 228 aaPredicted RBP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 PISDQ9UG56 409 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 NUP50Q9UKX7 468 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 SLC19A2O60779 497 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 ALDOBP05062 364 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 PRKACAP17612 351 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 ARHGDIBP52566 201 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 SLC26A5P58743 744 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 RPS15P62841 145 aaKnown RBP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 C17orf67Q0P5P2 114 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 AANATQ16613 207 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 LGALSLQ3ZCW2 172 aaPredicted RBP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 TMEM65Q6PI78 240 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 RABEPKQ7Z6M1 372 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 LRRC28Q86X40 367 aaPredicted RBP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 C1orf210Q8IVY1 113 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 OR51D1Q8NGF3 324 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 KIAA1143Q96AT1 154 aaPredicted RBP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 OR10A4Q9H209 315 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 SLC39A1Q9NY26 324 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 HAO2Q9NYQ3 351 aa12.49□□□□□ -0.41
TRIM4-201ENST00000349062 CGGBP1Q9UFW8 167 aaPredicted RBP12.49□□□□□ -0.41
TRIM4-201ENST00000349062 BOD1L1Q8NFC6 3051 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 RAMP1O60894 148 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 M6PRP20645 277 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 THBS2P35442 1172 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 TAGLNQ01995 201 aaKnown RBP12.48□□□□□ -0.41
TRIM4-201ENST00000349062 HSF2Q03933 536 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 SPOCK1Q08629 439 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 ACSM1Q08AH1 577 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 GRK1Q15835 563 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 EEF1A1P5Q5VTE0 462 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 CFAP77Q6ZQR2 320 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 NDUFAF7Q7L592 441 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 DCXRQ7Z4W1 244 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 JAGN1Q8N5M9 183 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 OR2G2Q8NGZ5 317 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 OR8S1Q8NH09 359 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 SYNPRQ8TBG9 265 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 SPACA5Q96QH8 159 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 MRPL39Q9NYK5 338 aaKnown RBP12.48□□□□□ -0.41
TRIM4-201ENST00000349062 KLK11Q9UBX7 282 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 B3GALT1Q9Y5Z6 326 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 A0A0G2JK05 382 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 SHOXO15266 292 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
TRIM4-201ENST00000349062 PNPP00491 289 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 MAP2K6P52564 334 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 SNTB2Q13425 540 aaKnown RBP12.48□□□□□ -0.41
TRIM4-201ENST00000349062 WDR38Q5JTN6 314 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 B3GNTL1Q67FW5 361 aaPredicted RBP12.48□□□□□ -0.41
TRIM4-201ENST00000349062 LRRC75AQ8NAA5 344 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 PLPP5Q8NEB5 264 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 ZFP64Q9NPA5 681 aa12.48□□□□□ -0.41
TRIM4-201ENST00000349062 SIGLEC5O15389 551 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 LMX1BO60663 402 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 CSN2P05814 226 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 H2AFB2P0C5Z0 115 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 SLC6A1P30531 599 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 PRSS12P56730 875 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 MFGE8Q08431 387 aaPredicted RBP12.47□□□□□ -0.41
TRIM4-201ENST00000349062 SIGLEC14Q08ET2 396 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 UBALD2Q8IYN6 164 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 NAXEQ8NCW5 288 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 RASL10BQ96S79 203 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 DDOQ99489 341 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 V9GY05 133 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 LOC101059948A0A1B0GTJ6 334 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 PLPP3O14495 311 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms