RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CCNB2O95067 398 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 SNAP29O95721 258 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 RENP00797 406 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 LCKP06239 509 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 SLC25A16P16260 332 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 ZNF32P17041 273 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 STOMP27105 288 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 LAP3P28838 519 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 PDLIM4P50479 330 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 TSPAN31Q12999 210 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 FHL1Q13642 323 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 MST1LQ2TV78 715 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 RFX4Q33E94 735 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 IQCCQ4KMZ1 466 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 PABPC1L2AQ5JQF8 200 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 ZER1Q7Z7L7 766 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 SYT9Q86SS6 491 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 C1orf174Q8IYL3 243 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 FGFBP3Q8TAT2 258 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 NEU4Q8WWR8 484 aaPredicted RBP13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 HTRA1Q92743 480 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 MRPL24Q96A35 216 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 IFT27Q9BW83 186 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 OR52D1Q9H346 318 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 GSX1Q9H4S2 264 aaPredicted RBP13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 YY1AP1Q9H869 796 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 IL20RAQ9UHF4 553 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 DUSP13Q9UII6 198 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 POLR1DQ9Y2S0 133 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 UGT2A1Q9Y4X1 527 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 A0A1W2PPW3 197 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 H7C1C5 153 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 M0R233 179 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 GNGT2O14610 69 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 IMPA2O14732 288 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 SYNGR3O43761 229 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 IDH3BO43837 385 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 SLC16A7O60669 478 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 MT-ND5P03915 603 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 HEXAP06865 529 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 RAP2AP10114 183 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 PCSK6P29122 969 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 CENPAP49450 140 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 HMGA2P52926 109 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 LCN6P62502 163 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 SCRN3Q0VDG4 424 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 GK3PQ14409 553 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 CARTPTQ16568 116 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 MESTQ5EB52 335 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 OR2T5Q6IEZ7 315 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 C1orf94Q6P1W5 598 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 PGM2L1Q6PCE3 622 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 FAM122BQ7Z309 247 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 CIARTQ8N365 385 aaPredicted RBP13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 CLDN22Q8N7P3 220 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 ICA1LQ8NDH6 482 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 ZNF540Q8NDQ6 660 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 OR2T29Q8NH02 315 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 SNX33Q8WV41 574 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 NABP1Q96AH0 204 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 RASD2Q96D21 266 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 PIMREGQ9BSJ6 248 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 FUZQ9BT04 418 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 POLE4Q9NR33 117 aa13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 NDRG4Q9ULP0 352 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 SAMHD1Q9Y3Z3 626 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 MAP1AP78559 2803 aaPredicted RBP13.61□□□□□ -0.23
TSPAN4-201ENST00000346501 IGKV1D-43A0A0B4J1Z2 117 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 AQP12BA6NM10 295 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 NDUFS8O00217 210 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 ARPC3O15145 178 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 UBOX5O94941 541 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 PPP1R3DO95685 299 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 TXNDC12O95881 172 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 MMP7P09237 267 aaPredicted RBP13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 FAM157BP0CG42 384 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 APEX1P27695 318 aaKnown RBP13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 MAGEA2P43356 314 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 ARHGDIAP52565 204 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 UCP2P55851 309 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 PPP2R2BQ00005 443 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 THSD4Q6ZMP0 1018 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 FOXL2NBQ6ZUU3 175 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 ZNF584Q8IVC4 421 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 GLB1L2Q8IW92 636 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 AQP12AQ8IXF9 295 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 ZNF525Q8N782 197 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 SORCS2Q96PQ0 1159 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 DOK1Q99704 481 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 BTBD10Q9BSF8 475 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 SYT4Q9H2B2 425 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 ELOVL3Q9HB03 270 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 VSX1Q9NZR4 365 aaPredicted RBP13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 LYVE1Q9Y5Y7 322 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 CELSR1Q9NYQ6 3014 aa13.6□□□□□ -0.23
TSPAN4-201ENST00000346501 TCRBV5S2A0A599 114 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 C5orf49A4QMS7 147 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 GPRIN2O60269 458 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 ATP5HO75947 161 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 LY6G6DO95868 133 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms