RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 C6orf47O95873 294 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 TFP02787 698 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 ABOP16442 354 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 AHCYP23526 432 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 CCR6P51684 374 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 SEC61A1P61619 476 aaKnown RBP6.56□□□□□ -1.36
ZNF540-202ENST00000343599 MRPS11P82912 194 aaKnown RBP6.56□□□□□ -1.36
ZNF540-202ENST00000343599 OR1C1Q15619 314 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 MOGAT3Q86VF5 341 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 LAS2Q8IYD9 372 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 ZNF611Q8N823 705 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 LINC01555Q8NAE3 123 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 OR6K3Q8NGY3 331 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 OR5J2Q8NH18 312 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 DAZLQ92904 295 aaKnown RBP6.56□□□□□ -1.36
ZNF540-202ENST00000343599 ATF6BQ99941 703 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 ABCG5Q9H222 651 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 PRDM7Q9NQW5 492 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 TEX10Q9NXF1 929 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-202ENST00000343599 FAM220BPB1ANY3 271 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 CIDEAO60543 219 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 TUSC2O75896 110 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 OR2A4O95047 310 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 HIST1H2ABP04908 130 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 OR4E1P0C645 316 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 GAAP10253 952 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 NID1P14543 1247 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 PPT1P50897 306 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 SSR4P51571 173 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 RAP2BP61225 183 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 RPL15P61313 204 aaKnown RBP6.56□□□□□ -1.36
ZNF540-202ENST00000343599 MLLT11Q13015 90 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-202ENST00000343599 OR8G1Q15617 311 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 GGTA1PQ4G0N0 100 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 AKIRIN2Q53H80 203 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 HIST3H2AQ7L7L0 130 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 SLC29A4Q7RTT9 530 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 DTX2Q86UW9 622 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 CSNK1A1LQ8N752 337 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 SPPL2AQ8TCT8 520 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 HIST1H2ACQ93077 130 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 ZNF385AQ96PM9 386 aaKnown RBP6.56□□□□□ -1.36
ZNF540-202ENST00000343599 OR2A7Q96R45 310 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 OR51B6Q9H340 312 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 FBXL3Q9UKT7 428 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 KCNIP3Q9Y2W7 256 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 NCOR2Q9Y618 2525 aa6.56□□□□□ -1.36
ZNF540-202ENST00000343599 FAM95CA0A1B0GW59 222 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 DVL2O14641 736 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 LANCL1O43813 399 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 OR10H2O60403 315 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 TFPIP10646 304 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 SAT1P21673 171 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 MC4RP32245 332 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 CDKN2CP42773 168 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 KIR3DL1P43629 444 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 NPBWR1P48145 328 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 SUMO3P55854 103 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-202ENST00000343599 CSNK1G2P78368 415 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 CDO1Q16878 200 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 XKR7Q5GH72 579 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 LRRN1Q6UXK5 716 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 CALHM3Q86XJ0 350 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 CACUL1Q86Y37 369 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 LRRC18Q8N456 261 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 OR2M7Q8NG81 312 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 OR6K2Q8NGY2 324 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 NEIL3Q8TAT5 605 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 SENP5Q96HI0 755 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-202ENST00000343599 KCTD7Q96MP8 289 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 THAP7Q9BT49 309 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-202ENST00000343599 ADAT1Q9BUB4 502 aaKnown RBP6.55□□□□□ -1.36
ZNF540-202ENST00000343599 FSD1LQ9BXM9 530 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 HDHD2Q9H0R4 259 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 OR51V1Q9H2C8 321 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 UBQLN3Q9H347 655 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 ISYNA1Q9NPH2 558 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 GPR179Q6PRD1 2367 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 FOXE1O00358 373 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-202ENST00000343599 EIF4E2O60573 245 aaKnown RBP6.55□□□□□ -1.36
ZNF540-202ENST00000343599 PLGP00747 810 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-202ENST00000343599 GZMMP51124 257 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 CTBP2P56545 445 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 SPHARQ15513 63 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 RNASE10Q5GAN6 216 aaKnown RBP6.55□□□□□ -1.36
ZNF540-202ENST00000343599 PRSS58Q8IYP2 241 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 BEND2Q8NDZ0 799 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 OR10A6Q8NH74 314 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 OR56B4Q8NH76 319 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 GCDHQ92947 438 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-202ENST00000343599 RAB3CQ96E17 227 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 BSCL2Q96G97 398 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-202ENST00000343599 TEAD3Q99594 435 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 EPYCQ99645 322 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 CLCF1Q9UBD9 225 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 COMMD3Q9UBI1 195 aa6.55□□□□□ -1.36
ZNF540-202ENST00000343599 XIRP2A4UGR9 3374 aa6.54□□□□□ -1.36
ZNF540-202ENST00000343599 AKAP13Q12802 2813 aa6.54□□□□□ -1.36
ZNF540-202ENST00000343599 GCN1Q92616 2671 aaKnown RBP6.54□□□□□ -1.36
ZNF540-202ENST00000343599 A0A1B0GTL3 188 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms