RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 COMMD9Q9P000 198 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 CKLFQ9UBR5 152 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 KIF25Q9UIL4 384 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 TMEM272A0A1B0GTI8 110 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 CCDC85CA6NKD9 419 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 MRPS10P82664 201 aaKnown RBP13□□□□□ -0.33
CPSF7-201ENST00000340437 DLX2Q07687 328 aaPredicted RBP13□□□□□ -0.33
CPSF7-201ENST00000340437 ACKR1Q16570 336 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 FBXO46Q6PJ61 603 aaPredicted RBP13□□□□□ -0.33
CPSF7-201ENST00000340437 UNQ6126/PRO20091Q6UXV3 157 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 ATG4DQ86TL0 474 aaPredicted RBP13□□□□□ -0.33
CPSF7-201ENST00000340437 COMMD2Q86X83 199 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 TMEM151BQ8IW70 566 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 ELSPBP1Q96BH3 223 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 PCOLCE2Q9UKZ9 415 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 MFSD2BA6NFX1 497 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 TMEM212A6NML5 194 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 H3BUI4 141 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 CYB5AP00167 134 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 PNMTP11086 282 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 CPN1P15169 458 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 AKR1C4P17516 323 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 MST1P26927 711 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 UBXN2BQ14CS0 331 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 GFOD2Q3B7J2 385 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 FAM122BQ7Z309 247 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 BPIFB2Q8N4F0 458 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 WNT2BQ93097 391 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 C4orf45Q96LM5 186 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 REG4Q9BYZ8 158 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 SEMA6CQ9H3T2 930 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 SNRPGP15A8MWD9 76 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 OR4E1P0C645 316 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 TNFRSF4P43489 277 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 ARRB1P49407 418 aaPredicted RBP13□□□□□ -0.33
CPSF7-201ENST00000340437 MOGAT2Q3SYC2 334 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 SLC22A6Q4U2R8 563 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 OR52W1Q6IF63 320 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 C3orf33Q6P1S2 294 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 ANKRD16Q6P6B7 361 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 SLC51BQ86UW2 128 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 OR1J4Q8NGS1 313 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 OR13C3Q8NGS6 347 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 SLC6A7Q99884 636 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 EMC3Q9P0I2 261 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 HIF3AQ9Y2N7 669 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 ETV7Q9Y603 341 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 AUP1Q9Y679 476 aa13□□□□□ -0.33
CPSF7-201ENST00000340437 TICRRQ7Z2Z1 1910 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 LTBP2Q14767 1821 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 HLA-AP01891 365 aaKnown RBP12.99□□□□□ -0.33
CPSF7-201ENST00000340437 EXOSC6Q5RKV6 272 aaKnown RBP12.99□□□□□ -0.33
CPSF7-201ENST00000340437 ZNF684Q5T5D7 378 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 SLC36A1Q7Z2H8 476 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 GVQW1Q8N7I0 195 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 COA3Q9Y2R0 106 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-201ENST00000340437 YBX2Q9Y2T7 364 aaKnown RBP12.99□□□□□ -0.33
CPSF7-201ENST00000340437 IL5P05113 134 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 CD2P06729 351 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 ZP3P21754 424 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 CXADRP78310 365 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 ZNF660Q6AZW8 331 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-201ENST00000340437 OBP2AQ9NY56 170 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 NPIPB9F8W1W9 429 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 ZNF749O43361 778 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 SRPX2O60687 465 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-201ENST00000340437 OR2A4O95047 310 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 CTLA4P16410 223 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 HTR2CP28335 458 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 AVPR2P30518 371 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 ZNF117Q03924 483 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 FMODQ06828 376 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 VWA2Q5GFL6 755 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 HDDC2Q7Z4H3 204 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 TOE1Q96GM8 510 aaKnown RBP12.99□□□□□ -0.33
CPSF7-201ENST00000340437 OR2A7Q96R45 310 aa12.99□□□□□ -0.33
CPSF7-201ENST00000340437 RIF1Q5UIP0 2472 aaKnown RBP12.98□□□□□ -0.33
CPSF7-201ENST00000340437 ZNF736B4DX44 427 aaPredicted RBP12.98□□□□□ -0.33
CPSF7-201ENST00000340437 ABHD16AO95870 558 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 DCNP07585 359 aaKnown RBP12.98□□□□□ -0.33
CPSF7-201ENST00000340437 CD34P28906 385 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 CD1CP29017 333 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 AKR1D1P51857 326 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 RPS4XP62701 263 aaKnown RBP12.98□□□□□ -0.33
CPSF7-201ENST00000340437 AKIRIN2Q53H80 203 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.98□□□□□ -0.33
CPSF7-201ENST00000340437 EID2Q8N6I1 236 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 TMEM185AQ8NFB2 350 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 LMX1AQ8TE12 382 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 PRODH2Q9UF12 536 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 MRPS18BQ9Y676 258 aaKnown RBP12.98□□□□□ -0.33
CPSF7-201ENST00000340437 TMEM14AQ9Y6G1 99 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 EML5Q05BV3 1969 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 C2orf16Q68DN1 1984 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 IGHV3-20A0A0C4DH32 117 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 LOC100289279A0A1B0GTE1 492 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 C5orf51A6NDU8 294 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 EPOPA6NHQ4 379 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 P2RY10O00398 339 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 HLA-DOBP13765 273 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms