RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 ZNF658BQ4V348 819 aaPredicted RBP10.82□□□□□ -0.68
USP1-201ENST00000339950 GLT8D1Q68CQ7 371 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 SLC18B1Q6NT16 456 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 MAMDC2Q7Z304 686 aaPredicted RBP10.82□□□□□ -0.68
USP1-201ENST00000339950 ZNF546Q86UE3 836 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 STX12Q86Y82 276 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 GVQW1Q8N7I0 195 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 OR6M1Q8NGM8 313 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 OR2I1PQ8NGU4 316 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 S100PBPQ96BU1 408 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 LRRC61Q9BV99 259 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 SEMA6CQ9H3T2 930 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 ISYNA1Q9NPH2 558 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 NPFFR2Q9Y5X5 522 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 GBF1Q92538 1859 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 F5H5P2 479 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 MASP2O00187 686 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 LMX1BO60663 402 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 HEXBP07686 556 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 IL11P20809 199 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 TRAM1Q15629 374 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 DMKNQ6E0U4 476 aaPredicted RBP10.82□□□□□ -0.68
USP1-201ENST00000339950 AWAT2Q6E213 333 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 KCTD18Q6PI47 426 aaPredicted RBP10.82□□□□□ -0.68
USP1-201ENST00000339950 NPEPL1Q8NDH3 523 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 CXorf58Q96LI9 332 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 MCOLN1Q9GZU1 580 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 CRISPLD2Q9H0B8 497 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 ANKRD19PQ9H560 264 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 FRRS1LQ9P0K9 344 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 SUSD2Q9UGT4 822 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 SCP2D1Q9UJQ7 156 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 SERTAD3Q9UJW9 196 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 MTCL1Q9Y4B5 1905 aaKnown RBP10.82□□□□□ -0.68
USP1-201ENST00000339950 IGHV3-64DA0A0J9YX35 117 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 PRR32B1ATL7 298 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 ZNF736B4DX44 427 aaPredicted RBP10.82□□□□□ -0.68
USP1-201ENST00000339950 ZNF749O43361 778 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 ATG12O94817 140 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 PMP2P02689 132 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 HOXB5P09067 269 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 CT45A8P0DMV1 189 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 CT45A9P0DMV2 189 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 ERGP11308 486 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 MAPK3P27361 379 aaPredicted RBP10.82□□□□□ -0.68
USP1-201ENST00000339950 AVPR2P30518 371 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 FGL1Q08830 312 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 CT45A2Q5DJT8 189 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 FAM76BQ5HYJ3 339 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 OR2AJ1Q8NGZ0 328 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 WNT2BQ93097 391 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 KISS1RQ969F8 398 aaPredicted RBP10.82□□□□□ -0.68
USP1-201ENST00000339950 DLL4Q9NR61 685 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 FGF21Q9NSA1 209 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 MRM2Q9UI43 246 aaKnown RBP10.82□□□□□ -0.68
USP1-201ENST00000339950 RHBDD3Q9Y3P4 386 aa10.82□□□□□ -0.68
USP1-201ENST00000339950 DENND4CQ5VZ89 1909 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 TMED7-TICAM2A0A0A6YYA0 188 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 SYT7O43581 403 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 TBX19O60806 448 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 NAT2P11245 290 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 CD38P28907 300 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 BTG1P62324 171 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 AANATQ16613 207 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 WDR38Q5JTN6 314 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 TIGD3Q6B0B8 471 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 CD300LFQ8TDQ1 290 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 DZANK1Q9NVP4 752 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 PARPBPQ9NWS1 579 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 ALKBH4Q9NXW9 302 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 TMED7Q9Y3B3 224 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 IGHV3-15A0A0B4J1V0 119 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 KIR2DS5A0A0G2JLQ3 304 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 A0A0G2JNG1 304 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 KIR2DS3K7RE56 304 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 CDK2AP1O14519 115 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 IGHV3-9P01782 118 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 CTLA4P16410 223 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 PGCP20142 388 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 LUMP51884 338 aaPredicted RBP10.81□□□□□ -0.68
USP1-201ENST00000339950 HNF4GQ14541 408 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 KIR2DS5Q14953 304 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 PDCD1Q15116 288 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 CDONQ4KMG0 1287 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 PLA1AQ53H76 456 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 TMEM17Q86X19 198 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 SLC2A12Q8TD20 617 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 NEK7Q8TDX7 302 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 PAQR8Q8TEZ7 354 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 RADILQ96JH8 1075 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 PGLYRP3Q96LB9 341 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 NUDT9Q9BW91 350 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 OR51B6Q9H340 312 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 ZNF230Q9UIE0 474 aaPredicted RBP10.81□□□□□ -0.68
USP1-201ENST00000339950 ZNF223Q9UK11 482 aaPredicted RBP10.81□□□□□ -0.68
USP1-201ENST00000339950 PCDHGA5Q9Y5G8 931 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 TEX51A0A1B0GUA7 166 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 NKX2-2O95096 273 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 CD34P28906 385 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 BIDP55957 195 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms