RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 MITD1Q8WV92 249 aa8.46□□□□□ -1.05
RPGR-202ENST00000339363 HAVCR1Q96D42 359 aa8.46□□□□□ -1.05
RPGR-202ENST00000339363 PTCHD1Q96NR3 888 aa8.46□□□□□ -1.05
RPGR-202ENST00000339363 TEAD3Q99594 435 aa8.46□□□□□ -1.05
RPGR-202ENST00000339363 TRMT61BQ9BVS5 477 aaKnown RBP8.46□□□□□ -1.05
RPGR-202ENST00000339363 ACTRT3Q9BYD9 372 aa8.46□□□□□ -1.05
RPGR-202ENST00000339363 CNTNAP3Q9BZ76 1288 aa8.46□□□□□ -1.05
RPGR-202ENST00000339363 FKRPQ9H9S5 495 aa8.46□□□□□ -1.05
RPGR-202ENST00000339363 TM7SF3Q9NS93 570 aa8.46□□□□□ -1.05
RPGR-202ENST00000339363 SIRT3Q9NTG7 399 aaPredicted RBP8.46□□□□□ -1.05
RPGR-202ENST00000339363 ATG4BQ9Y4P1 393 aa8.46□□□□□ -1.05
RPGR-202ENST00000339363 YIPF1Q9Y548 306 aa8.46□□□□□ -1.05
RPGR-202ENST00000339363 SCN3AQ9NY46 2000 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 MTCL1Q9Y4B5 1905 aaKnown RBP8.46□□□□□ -1.06
RPGR-202ENST00000339363 TRAV1-2A0A0B4J238 106 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 TSPAN11A1L157 253 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 RNF222A6NCQ9 220 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 ZNF705FA8MVS1 300 aaPredicted RBP8.46□□□□□ -1.06
RPGR-202ENST00000339363 SLCO2B1O94956 709 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 EOMESO95936 686 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 ZNF705DP0CH99 300 aaPredicted RBP8.46□□□□□ -1.06
RPGR-202ENST00000339363 ZNF705BP0CI00 300 aaPredicted RBP8.46□□□□□ -1.06
RPGR-202ENST00000339363 NT5EP21589 574 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 TSPAN7P41732 249 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 HNRNPKP61978 463 aaKnown RBP eCLIP8.46□□□□□ -1.06
RPGR-202ENST00000339363 LSM6P62312 80 aaKnown RBP8.46□□□□□ -1.06
RPGR-202ENST00000339363 SLC10A1Q14973 349 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 FAM46CQ5VWP2 391 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 LPCAT3Q6P1A2 487 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 GALNTL5Q7Z4T8 443 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 POC1BQ8TC44 478 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 PLD4Q96BZ4 506 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 ZNF700Q9H0M5 742 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 CBLN4Q9NTU7 201 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 OR5V1Q9UGF6 321 aa8.46□□□□□ -1.06
RPGR-202ENST00000339363 EXOGQ9Y2C4 368 aaKnown RBP8.46□□□□□ -1.06
RPGR-202ENST00000339363 UNC119BA6NIH7 251 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 PLPP1O14494 284 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 EREGO14944 169 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 SCGNO76038 276 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 SCGB1D1O95968 90 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 PLGP00747 810 aaPredicted RBP8.45□□□□□ -1.06
RPGR-202ENST00000339363 RPS2P15880 293 aaKnown RBP8.45□□□□□ -1.06
RPGR-202ENST00000339363 TYRP1P17643 537 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 IGFALSP35858 605 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 TAS2R19P59542 299 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 ANKRD39Q53RE8 183 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 SLC8B1Q6J4K2 584 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 SLC36A1Q7Z2H8 476 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 CAMKMTQ7Z624 323 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 MRPL41Q8IXM3 137 aaKnown RBP8.45□□□□□ -1.06
RPGR-202ENST00000339363 OR5P2Q8WZ92 322 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 COL26A1Q96A83 441 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 LMLNQ96KR4 655 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 HCAR1Q9BXC0 346 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 WNT5BQ9H1J7 359 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 NEUROD4Q9HD90 331 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 DMRT3Q9NQL9 472 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 MRPL22Q9NWU5 206 aaKnown RBP8.45□□□□□ -1.06
RPGR-202ENST00000339363 KCNG2Q9UJ96 466 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 CYP8B1Q9UNU6 501 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 MED19A0JLT2 244 aaPredicted RBP8.45□□□□□ -1.06
RPGR-202ENST00000339363 PAPLNO95428 1278 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 SCGB1D2O95969 90 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 THY1P04216 161 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 CHATP28329 748 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 CCR2P41597 374 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 PDE7AQ13946 482 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 CRMP1Q14194 572 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 STPG1Q5TH74 334 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 LANCL3Q6ZV70 420 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 ZNF584Q8IVC4 421 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 GABRG1Q8N1C3 465 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 VN1R2Q8NFZ6 395 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 TMEM255BQ8WV15 326 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 RAB24Q969Q5 203 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 NKX3-1Q99801 234 aaPredicted RBP8.45□□□□□ -1.06
RPGR-202ENST00000339363 PBDC1Q9BVG4 233 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 C6orf106Q9H6K1 298 aaPredicted RBP8.45□□□□□ -1.06
RPGR-202ENST00000339363 MED17Q9NVC6 651 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 HCFC1R1Q9NWW0 138 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 RNF186Q9NXI6 227 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 KNL1Q8NG31 2342 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 FAM171A2A8MVW0 826 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 H7BY64 318 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 H7C417 338 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 TMPRSS11DO60235 418 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 RCBTB2O95199 551 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 TSFMP43897 325 aaKnown RBP8.45□□□□□ -1.06
RPGR-202ENST00000339363 NCBP2P52298 156 aaKnown RBP eCLIP8.45□□□□□ -1.06
RPGR-202ENST00000339363 C21orf58P58505 322 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 IL10RAQ13651 578 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 GUK1Q16774 197 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 VWA2Q5GFL6 755 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 MBOAT2Q6ZWT7 520 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 VRK2Q86Y07 508 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 ZNF547Q8IVP9 402 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 ZNF283Q8N7M2 679 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 OR4K13Q8NH42 304 aa8.45□□□□□ -1.06
RPGR-202ENST00000339363 PLEKHA1Q9HB21 404 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms